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Combined quantum and molecular mechanics calculations on metalloproteins.
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scholarly article
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Europe PubMed Central
PubMed publication ID
12547438
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12547438%20AND%20SRC:MED&resulttype=core&format=json
retrieved
17 December 2019
review article
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stated in
Europe PubMed Central
title
Combined quantum and molecular mechanics calculations on metalloproteins
(English)
1 reference
stated in
Europe PubMed Central
PubMed publication ID
12547438
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12547438%20AND%20SRC:MED&resulttype=core&format=json
retrieved
17 December 2019
main subject
quantum biology
1 reference
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inferred from title
author
Ulf Ryde
series ordinal
1
1 reference
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Europe PubMed Central
PubMed publication ID
12547438
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12547438%20AND%20SRC:MED&resulttype=core&format=json
retrieved
17 December 2019
author name string
Ulf Ryde
series ordinal
1
1 reference
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Europe PubMed Central
PubMed publication ID
12547438
retrieved
6 August 2017
publication date
1 February 2003
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Europe PubMed Central
PubMed publication ID
12547438
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12547438%20AND%20SRC:MED&resulttype=core&format=json
retrieved
17 December 2019
published in
Current Opinion in Chemical Biology
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stated in
Europe PubMed Central
PubMed publication ID
12547438
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12547438%20AND%20SRC:MED&resulttype=core&format=json
retrieved
17 December 2019
volume
7
1 reference
stated in
Europe PubMed Central
PubMed publication ID
12547438
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12547438%20AND%20SRC:MED&resulttype=core&format=json
retrieved
17 December 2019
issue
1
1 reference
stated in
Europe PubMed Central
PubMed publication ID
12547438
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12547438%20AND%20SRC:MED&resulttype=core&format=json
retrieved
17 December 2019
page(s)
136-142
1 reference
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Europe PubMed Central
PubMed publication ID
12547438
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12547438%20AND%20SRC:MED&resulttype=core&format=json
retrieved
17 December 2019
cites work
Density functional theory of biologically relevant metal centers
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS1367-5931%2802%2900016-9
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7 January 2021
based on heuristic
inferred from DOI database lookup
Transition-metal systems in biochemistry studied by high-accuracy quantum chemical methods
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS1367-5931%2802%2900016-9
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7 January 2021
based on heuristic
inferred from DOI database lookup
Theoretical study of the discrimination between O(2) and CO by myoglobin
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS1367-5931%2802%2900016-9
retrieved
7 January 2021
based on heuristic
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Theoretical studies of enzymic reactions: dielectric, electrostatic and steric stabilization of the carbonium ion in the reaction of lysozyme
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS1367-5931%2802%2900016-9
retrieved
7 January 2021
based on heuristic
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Theoretical Methods for the Description of the Solvent Effect in Biomolecular Systems
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS1367-5931%2802%2900016-9
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Biomolecular simulations: recent developments in force fields, simulations of enzyme catalysis, protein-ligand, protein-protein, and protein-nucleic acid noncovalent interactions
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS1367-5931%2802%2900016-9
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
New developments in applying quantum mechanics to proteins.
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS1367-5931%2802%2900016-9
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Quantum mechanical methods for enzyme kinetics
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS1367-5931%2802%2900016-9
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Simulating enzyme reactions: challenges and perspectives
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS1367-5931%2802%2900016-9
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Simulation of enzyme reactions using valence bond force fields and other hybrid quantum/classical approaches
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS1367-5931%2802%2900016-9
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
A QM/MM study of the racemization of vinylglycolate catalyzed by mandelate racemase enzyme
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS1367-5931%2802%2900016-9
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
The Reaction Mechanism of Bovine Lens Leucine Aminopeptidase
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS1367-5931%2802%2900016-9
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Catalytic mechanism of matrix metalloproteinases: two-layered ONIOM study
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS1367-5931%2802%2900016-9
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
A comparative study of galactose oxidase and active site analogs based on QM/MM Car-Parrinello simulations.
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS1367-5931%2802%2900016-9
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7 January 2021
based on heuristic
inferred from DOI database lookup
Quantum Dynamics of Hydride Transfer in Enzyme Catalysis
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS1367-5931%2802%2900016-9
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Canonical Variational Theory for Enzyme Kinetics with the Protein Mean Force and Multidimensional Quantum Mechanical Tunneling Dynamics. Theory and Application to Liver Alcohol Dehydrogenase
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS1367-5931%2802%2900016-9
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Modeling the bacterial photosynthetic reaction center. 4. The structural, electrochemical, and hydrogen-bonding properties of 22 mutants of Rhodobacter sphaeroides
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS1367-5931%2802%2900016-9
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7 January 2021
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The importance of porphyrin distortions for the ferrochelatase reaction
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS1367-5931%2802%2900016-9
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7 January 2021
based on heuristic
inferred from DOI database lookup
Effects of the protein environment on the structure and energetics of active sites of metalloenzymes. ONIOM study of methane monooxygenase and ribonucleotide reductase
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS1367-5931%2802%2900016-9
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Inner-sphere reorganization energy of iron-sulfur clusters studied with theoretical methods
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS1367-5931%2802%2900016-9
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Quantum chemical geometry optimizations in proteins using crystallographic raw data
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS1367-5931%2802%2900016-9
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7 January 2021
based on heuristic
inferred from DOI database lookup
Reversible dioxygen binding to hemerythrin
1 reference
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Crossref
reference URL
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7 January 2021
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Influence of the heme pocket conformation on the structure and vibrations of the Fe-CO bond in myoglobin: a QM/MM density functional study
1 reference
stated in
Crossref
reference URL
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retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
On the significance of hydrogen bonds for the discrimination between CO and O2 by myoglobin
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS1367-5931%2802%2900016-9
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Molecular dynamics simulations of the mononuclear zinc-beta-lactamase from Bacillus cereus.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS1367-5931%2802%2900016-9
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7 January 2021
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inferred from DOI database lookup
The elusive oxidant species of cytochrome P450 enzymes: characterization by combined quantum mechanical/molecular mechanical (QM/MM) calculations
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS1367-5931%2802%2900016-9
retrieved
7 January 2021
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inferred from DOI database lookup
Elucidating the nature of enzyme catalysis utilizing a new twist on an old methodology: quantum mechanical-free energy calculations on chemical reactions in enzymes and in aqueous solution
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS1367-5931%2802%2900016-9
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Calculating structures and free energies of complex molecules: combining molecular mechanics and continuum models
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS1367-5931%2802%2900016-9
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Frontier Bonds in QM/MM Methods: A Comparison of Different Approaches
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS1367-5931%2802%2900016-9
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Polarizable force fields
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS1367-5931%2802%2900016-9
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Identifiers
DOI
10.1016/S1367-5931(02)00016-9
1 reference
stated in
Europe PubMed Central
PubMed publication ID
12547438
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12547438%20AND%20SRC:MED&resulttype=core&format=json
retrieved
17 December 2019
Fatcat ID
release_zjzrxcxsdffl7dgukpeugjqjza
1 reference
stated in
Fatcat
reference URL
https://api.fatcat.wiki/v0/release/zjzrxcxsdffl7dgukpeugjqjza
retrieved
24 November 2022
based on heuristic
mapped directly with Wikidata item
PubMed publication ID
12547438
1 reference
stated in
Europe PubMed Central
PubMed publication ID
12547438
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12547438%20AND%20SRC:MED&resulttype=core&format=json
retrieved
17 December 2019
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