(Q35080409)

6 August 2017

title

Mg2+-RNA interaction free energies and their relationship to the folding of RNA tertiary structures (English)

1 reference

6 August 2017

Dan Grilley

1

1 reference

6 August 2017

Ana Maria Soto

series ordinal

2

1 reference

6 August 2017

David E Draper

series ordinal

3

1 reference

6 August 2017

language of work or name

English

0 references

publication date

11 September 2006

1 reference

Proceedings of the National Academy of Sciences of the United States of America

6 August 2017

published in

1 reference

6 August 2017

volume

103

1 reference

6 August 2017

issue

38

1 reference

6 August 2017

page(s)

14003-14008

1 reference

Determining the Mg2+ stoichiometry for folding an RNA metal ion core

6 August 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1599903

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1599903

LINKED FUNCTIONS AND RECIPROCAL EFFECTS IN HEMOGLOBIN: A SECOND LOOK.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1599903

A compact RNA tertiary structure contains a buried backbone-K+ complex

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1599903

Metal ions and flexibility in a viral RNA pseudoknot at atomic resolution

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1599903

A thermodynamic framework for Mg2+ binding to RNA.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1599903

Energetics and cooperativity of tertiary hydrogen bonds in RNA structure

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1599903

A detailed view of a ribosomal active site: the structure of the L11-RNA complex

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1599903

Crystal structure of a conserved ribosomal protein-RNA complex

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1599903

Minor groove RNA triplex in the crystal structure of a ribosomal frameshifting viral pseudoknot

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1599903

Biochemical and NMR studies of RNA conformation with an emphasis on RNA pseudoknots

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1599903

Analysis of oligonucleotide structure using hyperchromism measurements at long wavelengths

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1599903

Bases defining an ammonium and magnesium ion-dependent tertiary structure within the large subunit ribosomal RNA.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1599903

Thermodynamic studies of transfer ribonucleic acids. I. Magnesium binding to yeast phenylalanine transfer ribonucleic acid

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1599903

Allosteric interpretation of Mg2+ binding to the denaturable Escherichia coli tRNAGlu2+

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1599903

Conformational changes of transfer RNA. The role of magnesium(II)

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1599903

Equilibrium binding of magnesium(II) by Escherichia coli tRNAfMet

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1599903

The linkage between magnesium binding and RNA folding.

8 July 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0606409103

Cooperative binding of magnesium to transfer ribonucleic acid studied by a fluorescent probe

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0606409103

Stabilization of RNA structure by Mg ions. Specific and non-specific effects.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0606409103

Time-resolved synchrotron X-ray "footprinting", a new approach to the study of nucleic acid structure and function: application to protein-DNA interactions and RNA folding.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0606409103

A Detailed View of a Ribosomal Active Site

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0606409103

Analysis of effects of salts and uncharged solutes on protein and nucleic acid equilibria and processes: a practical guide to recognizing and interpreting polyelectrolyte effects, Hofmeister effects, and osmotic effects of salts.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1599903

Affinities and selectivities of divalent cation binding sites within an RNA tertiary structure

27 September 2018

1 reference

12 December 2020

Energetics of a strongly pH dependent RNA tertiary structure in a frameshifting pseudoknot

1 reference

12 December 2020

Mg2+-dependent compaction and folding of yeast tRNAPhe and the catalytic domain of the B. subtilis RNase P RNA determined by small-angle X-ray scattering

1 reference

12 December 2020

The binding of Mg++ ions to polyadenylate, polyuridylate, and their complexes

1 reference

12 December 2020

tRNA Conformation and Magnesium Binding. A Study of Yeast Phenylalanine-Specific tRNA by a Fluorescent Indicator and Differential Melting Curves

1 reference

12 December 2020

Identifiers

DOI

10.1073/PNAS.0606409103

1 reference

6 August 2017

0 references

1 reference

6 August 2017

1 reference