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Application of a target enrichment-based next-generation sequencing protocol for identification and sequence-based prediction of pneumococcal serotypes

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Europe PubMed Central

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6 August 2017

Application of a target enrichment-based next-generation sequencing protocol for identification and sequence-based prediction of pneumococcal serotypes (English)

1 reference

Europe PubMed Central

PubMed publication ID

6 August 2017

Veranja Liyanapathirana

1

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24612771%20AND%20SRC:MED&resulttype=core&format=json

9 June 2020

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Irene Ang

2

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24612771%20AND%20SRC:MED&resulttype=core&format=json

9 June 2020

Dominic Tsang

3

1 reference

Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24612771%20AND%20SRC:MED&resulttype=core&format=json

9 June 2020

Kitty Fung

4

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24612771%20AND%20SRC:MED&resulttype=core&format=json

9 June 2020

Tak Keung Ng

5

1 reference

Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24612771%20AND%20SRC:MED&resulttype=core&format=json

9 June 2020

Haokui Zhou

6

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24612771%20AND%20SRC:MED&resulttype=core&format=json

9 June 2020

Margaret Ip

7

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24612771%20AND%20SRC:MED&resulttype=core&format=json

9 June 2020

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10 March 2014

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Europe PubMed Central

PubMed publication ID

6 August 2017

BMC Microbiology

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24612771%20AND%20SRC:MED&resulttype=core&format=json

9 June 2020

14

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24612771%20AND%20SRC:MED&resulttype=core&format=json

9 June 2020

60

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Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24612771%20AND%20SRC:MED&resulttype=core&format=json

9 June 2020

Standard method for detecting upper respiratory carriage of Streptococcus pneumoniae: updated recommendations from the World Health Organization Pneumococcal Carriage Working Group

1 reference

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9 July 2018

Serotyping of Streptococcus pneumoniae based on capsular genes polymorphisms.

1 reference

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9 July 2018

A genomic day in the life of a clinical microbiology laboratory

1 reference

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9 July 2018

Comprehensive mutation analysis for congenital muscular dystrophy: a clinical PCR-based enrichment and next-generation sequencing panel

1 reference

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9 July 2018

Assuring the quality of next-generation sequencing in clinical laboratory practice

1 reference

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9 July 2018

Genetic characterisation of Malawian pneumococci prior to the roll-out of the PCV13 vaccine using a high-throughput whole genome sequencing approach

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3984734

9 July 2018

Not all sequence tags are created equal: designing and validating sequence identification tags robust to indels

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3984734

9 July 2018

Rapid and easy identification of capsular serotypes of Streptococcus pneumoniae by use of fragment analysis by automated fluorescence-based capillary electrophoresis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3984734

9 July 2018

Rapid whole-genome sequencing for investigation of a neonatal MRSA outbreak

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3984734

9 July 2018

Sequetyping: serotyping Streptococcus pneumoniae by a single PCR sequencing strategy

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3984734

9 July 2018

Concurrent serotyping and genotyping of pneumococci by use of PCR and electrospray ionization mass spectrometry

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3984734

9 July 2018

Fast gapped-read alignment with Bowtie 2

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3984734

9 July 2018

COLD-PCR enrichment of rare cancer mutations prior to targeted amplicon resequencing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3984734

9 July 2018

A new microarray system to detect Streptococcus pneumoniae serotypes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3984734

9 July 2018

Improved detection of nasopharyngeal cocolonization by multiple pneumococcal serotypes by use of latex agglutination or molecular serotyping by microarray

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3984734

9 July 2018

Rapid pneumococcal evolution in response to clinical interventions

1 reference

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9 July 2018

Multiplex PCR-based reverse line blot hybridization assay to identify 23 Streptococcus pneumoniae polysaccharide vaccine serotypes

1 reference

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9 July 2018

Amplification of cDNA ends based on template-switching effect and step-out PCR.

1 reference

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9 July 2018

Evaluation of sequential multiplex PCR for direct detection of multiple serotypes of Streptococcus pneumoniae from nasopharyngeal secretions

1 reference

https://api.crossref.org/works/10.1186%2F1471-2180-14-60

21 January 2018

Laboratory-based diagnosis of pneumococcal pneumonia: state of the art and unmet needs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3984734

27 September 2018

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10.1186/1471-2180-14-60

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Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24612771%20AND%20SRC:MED&resulttype=core&format=json

9 June 2020

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PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24612771%20AND%20SRC:MED&resulttype=core&format=json

9 June 2020

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24612771%20AND%20SRC:MED&resulttype=core&format=json

9 June 2020

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