(Q35137949)

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Substrate dependence of conformational changes in the RNA-binding domain of tristetraprolin assessed by fluorescence spectroscopy of tryptophan mutants

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scholarly article

1 reference

Europe PubMed Central

6 August 2017

Substrate dependence of conformational changes in the RNA-binding domain of tristetraprolin assessed by fluorescence spectroscopy of tryptophan mutants (English)

1 reference

Europe PubMed Central

6 August 2017

fluorescence spectroscopy

0 references

author name string

Brandy Y Brewer

1

1 reference

Europe PubMed Central

6 August 2017

Jeff D Ballin

2

1 reference

Europe PubMed Central

6 August 2017

Elizabeth J Fialcowitz-White

3

1 reference

Europe PubMed Central

6 August 2017

Perry J Blackshear

4

1 reference

Europe PubMed Central

6 August 2017

Gerald M Wilson

5

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Europe PubMed Central

6 August 2017

language of work or name

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publication date

1 November 2006

1 reference

Europe PubMed Central

6 August 2017

1 reference

Europe PubMed Central

6 August 2017

45

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Europe PubMed Central

6 August 2017

46

1 reference

Europe PubMed Central

6 August 2017

13807-13817

1 reference

Europe PubMed Central

6 August 2017

AU-rich elements and associated factors: are there unifying principles?

1 reference

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13 July 2018

ARED 3.0: the large and diverse AU-rich transcriptome.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1640280

13 July 2018

Multiple processing body factors and the ARE binding protein TTP activate mRNA decapping

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1640280

13 July 2018

ARE-mRNA degradation requires the 5'-3' decay pathway.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1640280

13 July 2018

A hairpin-like structure within an AU-rich mRNA-destabilizing element regulates trans-factor binding selectivity and mRNA decay kinetics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1640280

13 July 2018

Involvement of microRNA in AU-rich element-mediated mRNA instability

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1640280

13 July 2018

Recruitment and activation of mRNA decay enzymes by two ARE-mediated decay activation domains in the proteins TTP and BRF-1

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1640280

13 July 2018

Unfolding and refolding pathways of a major kinetic trap in the oxidative folding of alpha-lactalbumin

1 reference

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13 July 2018

Recognition of the mRNA AU-rich element by the zinc finger domain of TIS11d

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1640280

13 July 2018

Identification of a target RNA motif for RNA-binding protein HuR.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1640280

13 July 2018

Facilitation of mRNA deadenylation and decay by the exosome-bound, DExH protein RHAU

1 reference

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13 July 2018

Patterns in interspecies similarity correlate with nucleotide composition in mammalian 3'UTRs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1640280

13 July 2018

Selective RNA Binding by a Single CCCH Zinc-Binding Domain from Nup475 (Tristetraprolin)

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1640280

13 July 2018

Characteristics of the interaction of a synthetic human tristetraprolin tandem zinc finger peptide with AU-rich element-containing RNA substrates

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1640280

13 July 2018

A Cys3His zinc-binding domain from Nup475/tristetraprolin: a novel fold with a disklike structure

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1640280

13 July 2018

AU-rich element-mediated translational control: complexity and multiple activities of trans-activating factors

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1640280

13 July 2018

Tristetraprolin and other CCCH tandem zinc-finger proteins in the regulation of mRNA turnover

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1640280

13 July 2018

https://pubmed.ncbi.nlm.nih.gov/17105199

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

RNA binding properties of the AU-rich element-binding recombinant Nup475/TIS11/tristetraprolin protein

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1640280

13 July 2018

Interactions of CCCH zinc finger proteins with mRNA: non-binding tristetraprolin mutants exert an inhibitory effect on degradation of AU-rich element-containing mRNAs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1640280

13 July 2018

AU binding proteins recruit the exosome to degrade ARE-containing mRNAs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1640280

13 July 2018

HuA and tristetraprolin are induced following T cell activation and display distinct but overlapping RNA binding specificities

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1640280

13 July 2018

Regulation of mRNA stability in mammalian cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1640280

13 July 2018

A novel mRNA-decapping activity in HeLa cytoplasmic extracts is regulated by AU-rich elements

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1640280

13 July 2018

Induced fit in RNA-protein recognition

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1640280

13 July 2018

Analysis of the AU-rich elements in the 3'-untranslated region of beta 2-adrenergic receptor mRNA by mutagenesis and identification of the homologous AU-rich region from different species

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1640280

13 July 2018

Assembly of AUF1 oligomers on U-rich RNA targets by sequential dimer association

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1640280

13 July 2018

Denaturant mediated unfolding of both native and molten globule states of maltose binding protein are accompanied by large deltaCp's

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1640280

13 July 2018

Evidence that tristetraprolin binds to AU-rich elements and promotes the deadenylation and destabilization of tumor necrosis factor alpha mRNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1640280

13 July 2018

Time-resolved and steady-state fluorescence quenching of N-acetyl-L-tryptophanamide by acrylamide and iodide.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1640280

13 July 2018

Toward understanding tryptophan fluorescence in proteins.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1640280

13 July 2018

Modulation of the fate of cytoplasmic mRNA by AU-rich elements: key sequence features controlling mRNA deadenylation and decay

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1640280

13 July 2018

Metal binding properties and secondary structure of the zinc-binding domain of Nup475.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1640280

13 July 2018

Fluorescence anisotropy: rapid, quantitative assay for protein-DNA and protein-protein interaction.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1640280

13 July 2018

AU-rich elements: characterization and importance in mRNA degradation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1640280

13 July 2018

Coupling of local folding to site-specific binding of proteins to DNA

1 reference

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13 July 2018

Resolution of multiphasic reactions by the combination of fluorescence total-intensity and anisotropy stopped-flow kinetic experiments

1 reference

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13 July 2018

Unfolding free energy changes determined by the linear extrapolation method. 1. Unfolding of phenylmethanesulfonyl alpha-chymotrypsin using different denaturants

1 reference

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13 July 2018

The role of mRNA and protein stability in gene expression

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1640280

13 July 2018

Influence of nonameric AU-rich tristetraprolin-binding sites on mRNA deadenylation and turnover

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1640280

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Dynamics of ATP-binding cassette contribute to allosteric control, nucleotide binding and energy transduction in ABC transporters

1 reference

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27 September 2018

RNA sequence elements required for high affinity binding by the zinc finger domain of tristetraprolin: conformational changes coupled to the bipartite nature of Au-rich MRNA-destabilizing motifs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1640280

27 September 2018

The search for trans-acting factors controlling messenger RNA decay.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1640280

27 September 2018

Fluorescence anisotropy applied to biomolecular interactions.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1640280

27 September 2018

Evidence for a 3'-5' decay pathway for c-myc mRNA in mammalian cells

1 reference

https://pubmed.ncbi.nlm.nih.gov/17105199

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1 reference

https://pubmed.ncbi.nlm.nih.gov/17105199

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structural remodeling of an A + U-rich RNA element by cation or AUF1 binding

1 reference

https://pubmed.ncbi.nlm.nih.gov/17105199

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1021/BI061320J

1 reference

Europe PubMed Central

6 August 2017

1 reference

Europe PubMed Central

6 August 2017

1 reference

Europe PubMed Central

6 August 2017

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