(Q35165327)

6 August 2017

title

Multiple in vivo pathways for Escherichia coli small ribosomal subunit assembly occur on one pre-rRNA (English)

1 reference

6 August 2017

1 reference

Neha Gupta

1

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6 August 2017

Gloria M Culver

series ordinal

2

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6 August 2017

publication date

7 September 2014

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Nature Structural & Molecular Biology

6 August 2017

published in

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6 August 2017

volume

21

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6 August 2017

issue

10

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6 August 2017

page(s)

937-943

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describes a project that uses

6 August 2017

ImageJ

1 reference

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC4355579/fullTextXML

based on heuristic

inferred from PubMed Central ID database lookup

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13 July 2018

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13 July 2018

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13 July 2018

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13 July 2018

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13 July 2018

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13 July 2018

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13 July 2018

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13 July 2018

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13 July 2018

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13 July 2018

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Structure of the ribosome at 5.5 A resolution and its interactions with functional ligands

13 July 2018

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13 July 2018

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Characterization of transient RNA-RNA interactions important for the facilitated structure formation of bacterial ribosomal 16S RNA.

13 July 2018

1 reference

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Novel Salmonella typhimurium properties in host--parasite interactions

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4355579

Construction and initial characterization of Escherichia coli strains with few or no intact chromosomal rRNA operons.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4355579

RNase G (CafA protein) and RNase E are both required for the 5' maturation of 16S ribosomal RNA.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4355579

Cluster analysis and display of genome-wide expression patterns

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4355579

Base complementarity in helix 2 of the central pseudoknot in 16S rRNA is essential for ribosome functioning

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4355579

Formation of the 5' end pseudoknot in small subunit ribosomal RNA: involvement of U3-like sequences

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4355579

Pseudoknot in the central domain of small subunit ribosomal RNA is essential for translation

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4355579

Antibiotic resistance mutations in 16S and 23S ribosomal RNA genes ofEscherichia coli

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4355579

Assembly mapping of 30S ribosomal proteins from E. coli

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4355579

Assembly mapping of 30 S ribosomal proteins from Escherichia coli. Further studies.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4355579

Isolation and characterization of a ribonuclease 3 deficient mutant of Escherichia coli.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4355579

Reconstitution of Escherichia coli 30 S Ribosomal Subunits from Purified Molecular Components

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4355579

Defining the structural requirements for a helix in 23 S ribosomal RNA that confers erythromycin resistance.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4355579

Structural analysis of RNA using chemical and enzymatic probing monitored by primer extension

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4355579

Binding of tRNA to the ribosomal A and P sites protects two distinct sets of nucleotides in 16 S rRNA.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4355579

Single base alterations upstream of the E. coli 16S rRNA coding region result in temperature-sensitive 16S rRNA expression.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4355579

A functional pseudoknot in 16S ribosomal RNA

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4355579

Mechanism and regulation of bacterial ribosomal RNA processing

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4355579

Intermediates and time kinetics of the in vivo assembly of Escherichia coli ribosomes

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4355579

Complementary sequences 1700 nucleotides apart form a ribonuclease III cleavage site in Escherichia coli ribosomal precursor RNA

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4355579

Novel ribosomal mutations affecting translational accuracy, antibiotic resistance and virulence of Salmonella typhimurium.

13 July 2018

1 reference

A role for 16S rRNA dimethyltransferase (ksgA) in intrinsic clarithromycin resistance in Mycobacterium tuberculosis.

21 January 2018

1 reference

Affinity purification of in vivo-assembled ribosomes for in vitro biochemical analysis.

21 January 2018

1 reference

The active site of the ribosome is composed of two layers of conserved nucleotides with distinct roles in peptide bond formation and peptide release

21 January 2018

1 reference

A cold-sensitive mutation in 16S rRNA provides evidence for helical switching in ribosome assembly

21 January 2018

1 reference

Following the dynamics of changes in solvent accessibility of 16 S and 23 S rRNA during ribosomal subunit association using synchrotron-generated hydroxyl radicals

21 January 2018

1 reference

Spectinomycin resistance at site 1192 in 16S ribosomal RNA of E. coli: an analysis of three mutants.

21 January 2018

1 reference

Mutants of the bacteriophage MS2 coat protein that alter its cooperative binding to RNA.

21 January 2018

1 reference

Ribosome biogenesis is temperature-dependent and delayed in Escherichia coli lacking the chaperones DnaK or DnaJ.

21 January 2018

1 reference

Chemical probing of RNA and RNA/protein complexes

21 January 2018

1 reference

The DnaK chaperone system facilitates 30S ribosomal subunit assembly.

21 January 2018

1 reference

Mechanistic insight into the ribosome biogenesis functions of the ancient protein KsgA.

21 January 2018

1 reference

Protein-independent Folding Pathway of the 16S rRNA 5′ Domain

21 January 2018

1 reference

Escherichia coli cafA gene encodes a novel RNase, designated as RNase G, involved in processing of the 5' end of 16S rRNA

21 January 2018

1 reference

Rapid chemical probing of conformation in 16 S ribosomal RNA and 30 S ribosomal subunits using primer extension

31 March 2020

1 reference

Assembly of the 30S ribosomal subunit

31 March 2020

1 reference

Mutations in the leader region of ribosomal RNA operons cause structurally defective 30 S ribosomes as revealed by in vivo structural probing

31 March 2020

1 reference

The function of ribosomal protein S21 in protein synthesis

31 March 2020

1 reference

31 March 2020

Identifiers

DOI

10.1038/NSMB.2887

1 reference

6 August 2017

1 reference

6 August 2017

1 reference