(Q35195952)

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Genome-scale analysis of metazoan replication origins reveals their organization in specific but flexible sites defined by conserved features

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scholarly article

1 reference

Europe PubMed Central

PubMed publication ID

7 August 2017

Genome-scale analysis of metazoan replication origins reveals their organization in specific but flexible sites defined by conserved features (English)

1 reference

Europe PubMed Central

PubMed publication ID

7 August 2017

7

1 reference

Europe PubMed Central

PubMed publication ID

7 August 2017

Marcel Méchali

11

0 references

author name string

Christelle Cayrou

1

1 reference

Europe PubMed Central

PubMed publication ID

7 August 2017

Philippe Coulombe

2

1 reference

Europe PubMed Central

PubMed publication ID

7 August 2017

Alice Vigneron

3

1 reference

Europe PubMed Central

PubMed publication ID

7 August 2017

Slavica Stanojcic

4

1 reference

Europe PubMed Central

PubMed publication ID

7 August 2017

Olivier Ganier

5

1 reference

Europe PubMed Central

PubMed publication ID

7 August 2017

Isabelle Peiffer

6

1 reference

Europe PubMed Central

PubMed publication ID

7 August 2017

Aurore Puy

8

1 reference

Europe PubMed Central

PubMed publication ID

7 August 2017

Sabine Laurent-Chabalier

9

1 reference

Europe PubMed Central

PubMed publication ID

7 August 2017

Romain Desprat

10

1 reference

Europe PubMed Central

PubMed publication ID

7 August 2017

publication date

12 July 2011

1 reference

Europe PubMed Central

PubMed publication ID

7 August 2017

Genome Research

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Europe PubMed Central

PubMed publication ID

7 August 2017

21

1 reference

Europe PubMed Central

PubMed publication ID

7 August 2017

9

1 reference

Europe PubMed Central

PubMed publication ID

7 August 2017

1438-1449

1 reference

Europe PubMed Central

PubMed publication ID

7 August 2017

Cell-type-specific replication initiation programs set fragility of the FRA3B fragile site

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166829

13 July 2018

Initiation of Epstein-Barr virus lytic replication requires transcription and the formation of a stable RNA-DNA hybrid molecule at OriLyt

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166829

13 July 2018

Eukaryotic DNA replication origins: many choices for appropriate answers

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166829

13 July 2018

Heterochromatin protein 1 (HP1) modulates replication timing of the Drosophila genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166829

13 July 2018

CpG islands--'a rough guide'.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166829

13 July 2018

Transcription initiation activity sets replication origin efficiency in mammalian cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166829

13 July 2018

Chromatin state marks cell-type- and gender-specific replication of the Drosophila genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166829

13 July 2018

Divergent transcription from active promoters

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166829

13 July 2018

Global reorganization of replication domains during embryonic stem cell differentiation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166829

13 July 2018

Genome-wide studies highlight indirect links between human replication origins and gene regulation.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166829

13 July 2018

Asymmetric bidirectional replication at the human DBF4 origin

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166829

13 July 2018

Overreplication of short DNA regions during S phase in human cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166829

13 July 2018

Dormant origins licensed by excess Mcm2-7 are required for human cells to survive replicative stress.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166829

13 July 2018

Replication in context: dynamic regulation of DNA replication patterns in metazoans

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166829

13 July 2018

High-resolution mapping reveals links of HP1 with active and inactive chromatin components

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166829

13 July 2018

DNA replication timing: random thoughts about origin firing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166829

13 July 2018

Genome-wide characterization of fission yeast DNA replication origins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166829

13 July 2018

DNA replication origin interference increases the spacing between initiation events in human cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166829

13 July 2018

Genome-wide identification of replication origins in yeast by comparative genomics.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166829

13 July 2018

HoxB domain induction silences DNA replication origins in the locus and specifies a single origin at its boundary.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166829

13 July 2018

Differential binding of replication proteins across the human c-myc replicator.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166829

13 July 2018

Broadening of DNA replication origin usage during metazoan cell differentiation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166829

13 July 2018

Replication-associated strand asymmetries in mammalian genomes: toward detection of replication origins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166829

13 July 2018

DNA replication origins in the Schizosaccharomyces pombe genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166829

13 July 2018

Prediction of Saccharomyces cerevisiae replication origins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166829

13 July 2018

Genome-wide distribution of DNA replication origins at A+T-rich islands in Schizosaccharomyces pombe

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166829

13 July 2018

Developmentally regulated usage of Physarum DNA replication origins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166829

13 July 2018

Paradoxes of eukaryotic DNA replication: MCM proteins and the random completion problem.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166829

13 July 2018

The dihydrofolate reductase origin of replication does not contain any nonredundant genetic elements required for origin activity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166829

13 July 2018

Developmental changes in the Sciara II/9A initiation zone for DNA replication

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166829

13 July 2018

Heterogeneity of eukaryotic replicons, replicon clusters, and replication foci

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166829

13 July 2018

Start sites of bidirectional DNA synthesis at the human lamin B2 origin

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166829

13 July 2018

Association of the origin recognition complex with heterochromatin and HP1 in higher eukaryotes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166829

13 July 2018

Dynamic molecular combing: stretching the whole human genome for high-resolution studies.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166829

13 July 2018

Regulation of replicon size in Xenopus egg extracts.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166829

13 July 2018

Asymmetric substitution patterns in the two DNA strands of bacteria

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166829

13 July 2018

Eukaryotic DNA replication: anatomy of an origin

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166829

13 July 2018

Chromosomal replication initiates and terminates at random sequences but at regular intervals in the ribosomal DNA of Xenopus early embryos

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166829

13 July 2018

The Chinese hamster dihydrofolate reductase origin consists of multiple potential nascent-strand start sites

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166829

13 July 2018

CpG islands and genes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166829

13 July 2018

The units of DNA replication in Drosophila melanogaster chromosomes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166829

13 July 2018

Strand separation required for initiation of replication at the chromosomal origin of E.coli is facilitated by a distant RNA-DNA hybrid

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166829

13 July 2018

Mitotic remodeling of the replicon and chromosome structure.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166829

26 September 2018

Progressive activation of DNA replication initiation in large domains of the immunoglobulin heavy chain locus during B cell development.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166829

26 September 2018

Dynamics of DNA replication in mammalian somatic cells: nucleotide pool modulates origin choice and interorigin spacing.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166829

26 September 2018

Initiation of DNA replication at CpG islands in mammalian chromosomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166829

26 September 2018

Transcriptional activation of initiation of replication from the E. coli chromosomal origin: an RNA-DNA hybrid near oriC.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166829

26 September 2018

Transition in specification of embryonic metazoan DNA replication origins

1 reference

https://pubmed.ncbi.nlm.nih.gov/21750104

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Replication profile of Saccharomyces cerevisiae chromosome VI

1 reference

https://pubmed.ncbi.nlm.nih.gov/21750104

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Replisome assembly at oriC, the replication origin of E. coli, reveals an explanation for initiation sites outside an origin

1 reference

https://pubmed.ncbi.nlm.nih.gov/21750104

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Chromosome replication in early development of Xenopus laevis

1 reference

https://pubmed.ncbi.nlm.nih.gov/21750104

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Initiation at closely spaced replication origins in a yeast chromosome

1 reference

https://pubmed.ncbi.nlm.nih.gov/21750104

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The heterochromatin protein Swi6/HP1 activates replication origins at the pericentromeric region and silent mating-type locus.

1 reference

https://pubmed.ncbi.nlm.nih.gov/21750104

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1101/GR.121830.111

1 reference

Europe PubMed Central

PubMed publication ID

7 August 2017

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

7 August 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

7 August 2017

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