(Q35206806)

7 August 2017

title

Temporal dynamics in the ruminal microbiome of dairy cows during the transition period (English)

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7 August 2017

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D W Pitta

1

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7 August 2017

S Kumar

2

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7 August 2017

B Vecchiarelli

3

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7 August 2017

D J Shirley

4

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7 August 2017

K Bittinger

5

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7 August 2017

L D Baker

6

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7 August 2017

J D Ferguson

7

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7 August 2017

N Thomsen

8

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7 August 2017

language of work or name

English

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publication date

14 July 2014

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Journal of Animal Science

7 August 2017

published in

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7 August 2017

volume

92

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7 August 2017

issue

9

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7 August 2017

page(s)

4014-4022

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Comparison of DNA extraction kits for PCR-DGGE analysis of human intestinal microbial communities from fecal specimens

7 August 2017

cites work

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https://api.crossref.org/works/10.2527%2FJAS.2014-7621

Regulation of organic nutrient metabolism during transition from late pregnancy to early lactation

21 January 2018

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Evaluation of bacterial diversity in the rumen and feces of cattle fed different levels of dried distillers grains plus solubles using bacterial tag-encoded FLX amplicon pyrosequencing.

21 January 2018

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PyNAST: a flexible tool for aligning sequences to a template alignment

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QIIME allows analysis of high-throughput community sequencing data

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A comparison of the efficiency of five different commercial DNA extraction kits for extraction of DNA from faecal samples

21 January 2018

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Search and clustering orders of magnitude faster than BLAST

21 January 2018

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https://api.crossref.org/works/10.2527%2FJAS.2014-7621

16S rDNA library-based analysis of ruminal bacterial diversity

21 January 2018

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https://api.crossref.org/works/10.2527%2FJAS.2014-7621

Archaea and fungi of the human gut microbiome: correlations with diet and bacterial residents

21 January 2018

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https://api.crossref.org/works/10.2527%2FJAS.2014-7621

Potential role of the bovine rumen microbiome in modulating milk composition and feed efficiency

21 January 2018

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https://api.crossref.org/works/10.2527%2FJAS.2014-7621

Composition and similarity of bovine rumen microbiota across individual animals

21 January 2018

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https://api.crossref.org/works/10.2527%2FJAS.2014-7621

The impact of different DNA extraction kits and laboratories upon the assessment of human gut microbiota composition by 16S rRNA gene sequencing

21 January 2018

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Comparative survey of rumen microbial communities and metabolites across one caprine and three bovine groups, using bar-coded pyrosequencing and ¹H nuclear magnetic resonance spectroscopy

21 January 2018

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https://api.crossref.org/works/10.2527%2FJAS.2014-7621

Diet-induced alterations in total and metabolically active microbes within the rumen of dairy cows

21 January 2018

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https://api.crossref.org/works/10.2527%2FJAS.2014-7621

Characterization of the rumen microbiota of pre-ruminant calves using metagenomic tools.

21 January 2018

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Technical note: Bacterial diversity and fermentation end products in rumen fluid samples collected via oral lavage or rumen cannula

21 January 2018

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UniFrac: a new phylogenetic method for comparing microbial communities

21 January 2018

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https://api.crossref.org/works/10.2527%2FJAS.2014-7621

The currently used commercial DNA-extraction methods give different results of clostridial and actinobacterial populations derived from human fecal samples

21 January 2018

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An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea

21 January 2018

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Production diseases of the transition cow.

21 January 2018

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Bacterial diversity associated with feeding dry forage at different dietary concentrations in the rumen contents of Mehshana buffalo (Bubalus bubalis) using 16S pyrotags.

21 January 2018

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https://api.crossref.org/works/10.2527%2FJAS.2014-7621

Rumen bacterial diversity dynamics associated with changing from bermudagrass hay to grazed winter wheat diets.

21 January 2018

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FastTree 2--approximately maximum-likelihood trees for large alignments

21 January 2018

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https://api.crossref.org/works/10.2527%2FJAS.2014-7621

Dominance of Prevotella and low abundance of classical ruminal bacterial species in the bovine rumen revealed by relative quantification real-time PCR.

21 January 2018

1 reference

https://api.crossref.org/works/10.2527%2FJAS.2014-7621

Diet-dependent shifts in the bacterial population of the rumen revealed with real-time PCR.

21 January 2018

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Methods for Dietary Fiber, Neutral Detergent Fiber, and Nonstarch Polysaccharides in Relation to Animal Nutrition

21 January 2018

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https://api.crossref.org/works/10.2527%2FJAS.2014-7621

Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy

21 January 2018

1 reference

https://api.crossref.org/works/10.2527%2FJAS.2014-7621

Correlation between composition of the bacterial community and concentration of volatile fatty acids in the rumen during the transition period and ketosis in dairy cows

21 January 2018

1 reference

https://api.crossref.org/works/10.2527%2FJAS.2014-7621

Shifts in bacterial community composition in the rumen of lactating dairy cows under milk fat-depressing conditions

21 January 2018

1 reference

https://api.crossref.org/works/10.2527%2FJAS.2014-7621

Phylogenetic analysis of rumen bacteria by comparative sequence analysis of cloned 16S rRNA genes.

21 January 2018

1 reference

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Sampling and pyrosequencing methods for characterizing bacterial communities in the human gut using 16S sequence tags

21 January 2018

1 reference

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21 January 2018

Identifiers

DOI

10.2527/JAS.2014-7621

1 reference

release_jebrztgvdzgwlki32qgzvl5vzu

7 August 2017

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/jebrztgvdzgwlki32qgzvl5vzu

mapped directly with Wikidata item

24 November 2022

based on heuristic

1 reference