(Q35207609)

7 August 2017

title

PromH: Promoters identification using orthologous genomic sequences (English)

1 reference

7 August 2017

1

1 reference

7 August 2017

Shahmuradov IA

2

1 reference

7 August 2017

language of work or name

English

0 references

publication date

1 July 2003

1 reference

7 August 2017

published in

Nucleic Acids Research

1 reference

7 August 2017

volume

31

1 reference

7 August 2017

issue

13

1 reference

7 August 2017

page(s)

3540-3545

1 reference

A gene expression map of human chromosome 21 orthologues in the mouse

7 August 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168932

Initial sequencing and comparative analysis of the mouse genome

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168932

Computational detection and location of transcription start sites in mammalian genomic DNA

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168932

Dragon Promoter Finder: recognition of vertebrate RNA polymerase II promoters

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168932

Core promoters: active contributors to combinatorial gene regulation

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168932

First pass annotation of promoters on human chromosome 22.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168932

Orchestrated response: a symphony of transcription factors for gene control

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168932

Highly specific localization of promoter regions in large genomic sequences by PromoterInspector: a novel context analysis approach

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168932

TRANSFAC: an integrated system for gene expression regulation

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168932

The eukaryotic promoter database (EPD).

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168932

The biology of eukaryotic promoter prediction--a review

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168932

Interpolated markov chains for eukaryotic promoter recognition.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168932

The downstream core promoter element, DPE, is conserved from Drosophila to humans and is recognized by TAFII60 of Drosophila

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168932

Eukaryotic promoter recognition

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168932

Transcription initiation from TATA-less promoters within eukaryotic protein-coding genes

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168932

Status of the transcription factors database (TFD).

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168932

Human-mouse genome comparisons to locate regulatory sites

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168932

Promoter2.0: for the recognition of PolII promoter sequences.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168932

Models for prediction and recognition of eukaryotic promoters

26 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/12824362

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identification and analysis of eukaryotic promoters: recent computational approaches

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/12824362

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Joint modeling of DNA sequence and physical properties to improve eukaryotic promoter recognition

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/12824362

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/GKG525

1 reference

7 August 2017

DBLP publication ID

journals/nar/SolovyevS03

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

7 August 2017

1 reference