(Q35207993)

7 August 2017

WEB-THERMODYN: Sequence analysis software for profiling DNA helical stability (English)

1 reference

7 August 2017

0 references

Yanlin Huang

1

1 reference

PubMed ID

12824427

7 August 2017

David Kowalski

series ordinal

2

1 reference

PubMed ID

12824427

7 August 2017

language of work or name

English

0 references

publication date

1 July 2003

1 reference

7 August 2017

Nucleic Acids Research

1 reference

7 August 2017

31

1 reference

7 August 2017

3819-3821

1 reference

7 August 2017

13

1 reference

Identification of a candidate regulatory region in the human CD8 gene complex by colocalization of DNase I hypersensitive sites and matrix attachment regions which bind SATB1 and GATA-3

7 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168969

The inefficient replication origin from yeast ribosomal DNA is naturally impaired in the ARS consensus sequence and in DNA unwinding.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168969

Functional equivalency and diversity of cis-acting elements among yeast replication origins

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168969

Ease of DNA unwinding is a conserved property of yeast replication origins

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168969

Easily unwound DNA sequences and hairpin structures in the Epstein-Barr virus origin of plasmid replication.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168969

Targeted melting and binding of a DNA regulatory element by a transactivator of c-myc

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168969

Neuron specificity of the neurofilament light promoter in transgenic mice requires the presence of DNA unwinding elements

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168969

Predicting DNA duplex stability from the base sequence

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168969

Altered DNA conformations detected by mung bean nuclease occur in promoter and terminator regions of supercoiled pBR322 DNA.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168969

Stable DNA unwinding, not "breathing," accounts for single-strand-specific nuclease hypersensitivity of specific A+T-rich sequences

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168969

Localized melting and structural changes in the SV40 origin of replication induced by T-antigen.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168969

Duplex opening by dnaA protein at novel sequences in initiation of replication at the origin of the E. coli chromosome

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168969

The ease of DNA unwinding as a determinant of initiation at yeast replication origins

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168969

The DNA unwinding element: a novel, cis-acting component that facilitates opening of the Escherichia coli replication origin

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168969

Torsional stress stabilizes extended base unpairing in suppressor sites flanking immunoglobulin heavy chain enhancer

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168969

DNA helical stability accounts for mutational defects in a yeast replication origin

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168969

Biological significance of unwinding capability of nuclear matrix-associating DNAs

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168969

DNA helical instability facilitates initiation at the SV40 replication origin

28 July 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/12824427

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

RNA-DNA hybrid formation at a bacteriophage T4 replication origin

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/12824427

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/GKG562

1 reference

7 August 2017

journals/nar/HuangK03

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

7 August 2017

1 reference

PubMed ID

12824427