(Q35214624)

7 August 2017

title

Crystal structure of pi initiator protein-iteron complex of plasmid R6K: implications for initiation of plasmid DNA replication (English)

1 reference

7 August 2017

Michael K Swan

1

1 reference

7 August 2017

Deepak Bastia

series ordinal

2

1 reference

7 August 2017

Christopher Davies

series ordinal

3

1 reference

7 August 2017

language of work or name

English

0 references

publication date

21 November 2006

1 reference

7 August 2017

number of pages

6

1 reference

Proceedings of the National Academy of Sciences of the United States of America

inferred from page(s)

published in

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7 August 2017

volume

103

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7 August 2017

issue

49

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7 August 2017

page(s)

18481-18486

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The DnaK-DnaJ-GrpE chaperone system activates inert wild type pi initiator protein of R6K into a form active in replication initiation

7 August 2017

cites work

1 reference

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13 July 2018

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Biochemical investigations of control of replication initiation of plasmid R6K.

13 July 2018

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Reconstitution of R6K DNA replication in vitro using 22 purified proteins

13 July 2018

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13 July 2018

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Automated structure solution, density modification and model building

13 July 2018

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Mechanistic aspects of DnaA-RepA interaction as revealed by yeast forward and reverse two-hybrid analysis

13 July 2018

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Monomer/dimer ratios of replication protein modulate the DNA strand-opening in a replication origin

13 July 2018

1 reference

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Crystal structure of a prokaryotic replication initiator protein bound to DNA at 2.6 Å resolution

13 July 2018

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Automated MAD and MIR structure solution

13 July 2018

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Mechanism of recruitment of DnaB helicase to the replication origin of the plasmid pSC101.

13 July 2018

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Crystallography & NMR System: A New Software Suite for Macromolecular Structure Determination

13 July 2018

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Mechanistic studies of initiator-initiator interaction and replication initiation

13 July 2018

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Role of TrfA and DnaA proteins in origin opening during initiation of DNA replication of the broad host range plasmid RK2.

13 July 2018

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The replication initiator protein pi of the plasmid R6K specifically interacts with the host-encoded helicase DnaB.

13 July 2018

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Activation of DNA binding by the monomeric form of the P1 replication initiator RepA by heat shock proteins DnaJ and DnaK.

13 July 2018

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Multiple pathways of copy control of gamma replicon of R6K: mechanisms both dependent on and independent of cooperativity of interaction of tau protein with DNA affect the copy number

13 July 2018

1 reference

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Primary structure of the replication initiation protein of plasmid R6K.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1693688

Rapid purification of a cloned gene product by genetic fusion and site-specific proteolysis

13 July 2018

1 reference

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Trans- and cis-acting elements for the replication of P1 miniplasmids.

13 July 2018

1 reference

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Detection of DNA looping due to simultaneous interaction of a DNA-binding protein with two spatially separated binding sites on DNA

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1693688

P1 plasmid replication: initiator sequestration is inadequate to explain control by initiator-binding sites

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1693688

Negative control of plasmid R6K replication: possible role of intermolecular coupling of replication origins

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1693688

N-terminal truncated forms of the bifunctional pi initiation protein express negative activity on plasmid R6K replication.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1693688

Activation of distant replication origins in vivo by DNA looping as revealed by a novel mutant form of an initiator protein defective in cooperativity at a distance

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1693688

Bidirectional replication of plasmid R6K DNA in Escherichia coli; correspondence between origin of replication and position of single-strand break in relaxed complex

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1693688

Trans-complementation-dependent replication of a low molecular weight origin fragment from plasmid R6K

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1693688

Molecular cloning of replication and incompatibility regions from the R-plasmid R6K

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1693688

Plasmid P1 RepA is homologous to the F plasmid RepE class of initiators.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1693688

TrfA dimers play a role in copy-number control of RK2 replication

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1693688

Isolation and characterization of DNA-binding mutants of a plasmid replication initiation protein utilizing an in vivo binding assay

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1693688

Plasmid R6K DNA replication. I. Complete nucleotide sequence of an autonomously replicating segment

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1693688

Activity in vitro of three replication origins of the antibiotic resistance plasmid RSF1040

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1693688

Expression in Saccharomyces cerevisiae of a gene associated with cytoplasmic male sterility from maize: respiratory dysfunction and uncoupling of yeast mitochondria.

26 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.1073%2FPNAS.0609046103

[27] Maximum-likelihood heavy-atom parameter refinement for multiple isomorphous replacement and multiwavelength anomalous diffraction methods.

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1073%2FPNAS.0609046103

A conformational switch between transcriptional repression and replication initiation in the RepA dimerization domain

21 January 2018

1 reference

12 December 2020

Oligomeric initiator protein-mediated DNA looping negatively regulates plasmid replication in vitro by preventing origin melting

1 reference

12 December 2020

Conformational changes in a replication origin induced by an initiator protein

1 reference

12 December 2020

Enhancer-origin interaction in plasmid R6K involves a DNA loop mediated by initiator protein

1 reference

12 December 2020

Interaction of the plasmid R6K-encoded replication initiator protein with its binding sites on DNA

1 reference

12 December 2020

Three origins of replication are active in vivo in the R plasmid RSF1040

1 reference

12 December 2020

The replication initiator protein of plasmid R6K tagged with beta-galactosidase shows sequence-specific DNA-binding

1 reference

12 December 2020

DNA-protein interaction at the origin of DNA replication of the plasmid pSC101

1 reference

12 December 2020

Identifiers

DOI

10.1073/PNAS.0609046103

1 reference

7 August 2017

0 references

1 reference

7 August 2017

1 reference