(Q35234386)

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Escherichia coli single-stranded DNA-binding protein mediates template recycling during transcription by bacteriophage N4 virion RNA polymerase

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scholarly article

1 reference

Europe PubMed Central

PubMed publication ID

7 August 2017

Escherichia coli single-stranded DNA-binding protein mediates template recycling during transcription by bacteriophage N4 virion RNA polymerase (English)

1 reference

Europe PubMed Central

PubMed publication ID

7 August 2017

1 reference

based on heuristic

inferred from title

1 reference

based on heuristic

inferred from title

Escherichia coli

1 reference

based on heuristic

inferred from title

author name string

Elena K Davydova

1

1 reference

Europe PubMed Central

PubMed publication ID

7 August 2017

Lucia B Rothman-Denes

2

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Europe PubMed Central

PubMed publication ID

7 August 2017

language of work or name

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publication date

22 July 2003

1 reference

Europe PubMed Central

PubMed publication ID

7 August 2017

Proceedings of the National Academy of Sciences of the United States of America

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Europe PubMed Central

PubMed publication ID

7 August 2017

100

1 reference

Europe PubMed Central

PubMed publication ID

7 August 2017

16

1 reference

Europe PubMed Central

PubMed publication ID

7 August 2017

9250-9255

1 reference

Europe PubMed Central

PubMed publication ID

7 August 2017

Structure of a T7 RNA polymerase elongation complex at 2.9 A resolution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170904

27 July 2018

Structural basis for the transition from initiation to elongation transcription in T7 RNA polymerase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170904

27 July 2018

Structure of the DNA binding domain of E. coli SSB bound to ssDNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170904

27 July 2018

Identification and characterization of the single-stranded DNA-binding protein of bacteriophage P1.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170904

27 July 2018

Sequence and DNA structural determinants of N4 virion RNA polymerase-promoter recognition

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170904

27 July 2018

The chi psi subunits of DNA polymerase III holoenzyme bind to single-stranded DNA-binding protein (SSB) and facilitate replication of an SSB-coated template

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170904

27 July 2018

RNA-binding site in T7 RNA polymerase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170904

27 July 2018

Structure of T7 RNA polymerase complexed to the transcriptional inhibitor T7 lysozyme

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170904

27 July 2018

Devoted to the lagging strand-the subunit of DNA polymerase III holoenzyme contacts SSB to promote processive elongation and sliding clamp assembly

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170904

27 July 2018

On the evolution of the single-subunit RNA polymerases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170904

27 July 2018

Crystal structure of human mitochondrial single-stranded DNA binding protein at 2.4 A resolution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170904

27 July 2018

In vitro and in vivo function of the C-terminus of Escherichia coli single-stranded DNA binding protein

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170904

27 July 2018

Cloning of human and rat cDNAs encoding the mitochondrial single-stranded DNA-binding protein (SSB)

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170904

27 July 2018

Effects of base composition on the negative cooperativity and binding mode transitions of Escherichia coli SSB-single-stranded DNA complexes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170904

27 July 2018

Single-stranded-DNA-binding proteins from human mitochondria and Escherichia coli have analogous physicochemical properties.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170904

27 July 2018

Escherichia coli single-stranded DNA-binding protein: multiple DNA-binding modes and cooperativities

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170904

27 July 2018

Photocrosslinking of 5-iodouracil-substituted RNA and DNA to proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170904

27 July 2018

Interactions of bacteriophage T4-coded gene 32 protein with nucleic acids. I. Characterization of the binding interactions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170904

27 July 2018

F sex factor encodes a single-stranded DNA binding protein (SSB) with extensive sequence homology to Escherichia coli SSB.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170904

27 July 2018

F sex factor of Escherichia coli K-12 codes for a single-stranded DNA binding protein

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170904

27 July 2018

Limited proteolysis studies on the Escherichia coli single-stranded DNA binding protein. Evidence for a functionally homologous domain in both the Escherichia coli and T4 DNA binding proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170904

27 July 2018

Sequences of the ssb gene and protein

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170904

27 July 2018

N4 virion RNA polymerase sites of transcription initiation.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170904

27 July 2018

Two binding modes in Escherichia coli single strand binding protein-single stranded DNA complexes. Modulation by NaCl concentration.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170904

27 July 2018

Oligoribonucleotide synthesis using T7 RNA polymerase and synthetic DNA templates

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170904

27 July 2018

Equilibrium binding of Escherichia coli single-strand binding protein to single-stranded nucleic acids in the (SSB)65 binding mode. Cation and anion effects and polynucleotide specificity.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170904

27 July 2018

Large-scale overproduction and rapid purification of the Escherichia coli ssb gene product. Expression of the ssb gene under lambda PL control.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170904

27 July 2018

Negative co-operativity in Escherichia coli single strand binding protein-oligonucleotide interactions. I. Evidence and a quantitative model

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170904

27 July 2018

Processivity of proteolytically modified forms of T7 RNA polymerase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170904

27 July 2018

The single-stranded-DNA-binding protein encoded by the Escherichia coli F factor can complement a deletion of the chromosomal ssb gene

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170904

27 July 2018

Monomers of the Escherichia coli SSB-1 mutant protein bind single-stranded DNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170904

27 July 2018

Purification and characterization of the bacteriophage T7 gene 2.5 protein. A single-stranded DNA-binding protein

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170904

27 July 2018

Escherichia coli single-stranded DNA-binding protein is a supercoiled template-dependent transcriptional activator of N4 virion RNA polymerase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170904

27 July 2018

Use of the Escherichia coli SSB gene to prevent bioreactor takeover by plasmidless cells.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170904

27 July 2018

Novel template requirements of N4 virion RNA polymerase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170904

27 July 2018

Virion-associated RNA polymerase required for bacteriophage N4 development

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170904

27 July 2018

Mutant single-strand binding protein of Escherichia coli: genetic and physiological characterization

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170904

27 July 2018

Specific sequences and a hairpin structure in the template strand are required for N4 virion RNA polymerase promoter recognition

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1133325100

21 January 2018

A common core for binding single-stranded DNA: structural comparison of the single-stranded DNA-binding proteins (SSB) from E. coli and human mitochondria.

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1133325100

21 January 2018

The phage N4 virion RNA polymerase catalytic domain is related to single-subunit RNA polymerases

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1133325100

21 January 2018

Crystal structure of the homo-tetrameric DNA binding domain of Escherichia coli single-stranded DNA-binding protein determined by multiwavelength x-ray diffraction on the selenomethionyl protein at 2.9-A resolution

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1133325100

21 January 2018

A mutant T7 RNA polymerase that is defective in RNA binding and blocked in the early stages of transcription

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1133325100

21 January 2018

E. coli SSB activates N4 virion RNA polymerase promoters by stabilizing a DNA hairpin required for promoter recognition

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1133325100

21 January 2018

Escherichia coli single-strand binding protein forms multiple, distinct complexes with single-stranded DNA

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1133325100

21 January 2018

Isolation and characterization of gene 5 protein of filamentous bacterial viruses

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1133325100

21 January 2018

The mutagenesis protein MucB interacts with single strand DNA binding protein and induces a major conformational change in its complex with single-stranded DNA

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1133325100

21 January 2018

Interaction of E. coli single-stranded DNA binding protein (SSB) with exonuclease I. The carboxy-terminus of SSB is the recognition site for the nuclease

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1133325100

21 January 2018

Major conformational changes occur during the transition from an initiation complex to an elongation complex by T7 RNA polymerase

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1133325100

21 January 2018

Characterization of the Escherichia coli SSB-113 mutant single-stranded DNA-binding protein. Cloning of the gene, DNA and protein sequence analysis, high pressure liquid chromatography peptide mapping, and DNA-binding studies

1 reference

https://pubmed.ncbi.nlm.nih.gov/12876194

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Characterization of the structural and functional defect in the Escherichia coli single-stranded DNA binding protein encoded by the ssb-1 mutant gene. Expression of the ssb-1 gene under lambda pL regulation

1 reference

https://pubmed.ncbi.nlm.nih.gov/12876194

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Purification and characterization of the coliphage N4-coded single-stranded DNA binding protein

1 reference

https://pubmed.ncbi.nlm.nih.gov/12876194

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1073/PNAS.1133325100

1 reference

Europe PubMed Central

PubMed publication ID

7 August 2017

2003PNAS..100.9250D

0 references

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

7 August 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

7 August 2017

ResearchGate publication ID

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