(Q35272327)

7 August 2017

title

Dissecting complex metabolic integration provides direct genetic evidence for CodY activation by guanine nucleotides (English)

1 reference

7 August 2017

Shaun R Brinsmade

1

1 reference

7 August 2017

Abraham L Sonenshein

series ordinal

2

1 reference

7 August 2017

language of work or name

English

0 references

publication date

19 August 2011

1 reference

7 August 2017

published in

Journal of Bacteriology

1 reference

7 August 2017

volume

193

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7 August 2017

issue

20

1 reference

7 August 2017

page(s)

5637-5648

1 reference

Contributions of multiple binding sites and effector-independent binding to CodY-mediated regulation in Bacillus subtilis

7 August 2017

cites work

1 reference

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12 July 2018

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12 July 2018

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12 July 2018

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Heavy involvement of stringent transcription control depending on the adenine or guanine species of the transcription initiation site in glucose and pyruvate metabolism in Bacillus subtilis.

12 July 2018

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12 July 2018

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The global regulator CodY regulates toxin gene expression in Bacillus anthracis and is required for full virulence

12 July 2018

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Structural rearrangement accompanying ligand binding in the GAF domain of CodY from Bacillus subtilis.

12 July 2018

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CodY in Staphylococcus aureus: a regulatory link between metabolism and virulence gene expression

12 July 2018

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Molecular mechanisms underlying the positive stringent response of the Bacillus subtilis ilv-leu operon, involved in the biosynthesis of branched-chain amino acids

12 July 2018

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Global regulation by (p)ppGpp and CodY in Streptococcus mutans

12 July 2018

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Genetic and biochemical analysis of CodY-binding sites in Bacillus subtilis

12 July 2018

1 reference

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CodY of Streptococcus pneumoniae: link between nutritional gene regulation and colonization

12 July 2018

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Interaction of Bacillus subtilis CodY with GTP.

12 July 2018

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Repression of Clostridium difficile toxin gene expression by CodY.

12 July 2018

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Characterization of relA and codY mutants of Listeria monocytogenes: identification of the CodY regulon and its role in virulence

12 July 2018

1 reference

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Essential bacterial functions encoded by gene pairs.

12 July 2018

1 reference

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Role of the Fur regulon in iron transport in Bacillus subtilis

12 July 2018

1 reference

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Overall control of nitrogen metabolism in Lactococcus lactis by CodY, and possible models for CodY regulation in Firmicutes.

12 July 2018

1 reference

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The Lactococcus lactis CodY regulon: identification of a conserved cis-regulatory element.

12 July 2018

1 reference

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A region of Bacillus subtilis CodY protein required for interaction with DNA.

12 July 2018

1 reference

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Elaborate transcription regulation of the Bacillus subtilis ilv-leu operon involved in the biosynthesis of branched-chain amino acids through global regulators of CcpA, CodY and TnrA.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187194

Activation of the Bacillus subtilis global regulator CodY by direct interaction with branched-chain amino acids

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187194

Recent developments in bacterial cold-shock response

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187194

Transcriptional organization and posttranscriptional regulation of the Bacillus subtilis branched-chain amino acid biosynthesis genes

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187194

Transduction of linked genetic characters of the host by bacteriophage P1.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187194

CodY Is a Nutritional Repressor of Flagellar Gene Expression in Bacillus subtilis

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187194

Methionine regeneration and aminotransferases in Bacillus subtilis, Bacillus cereus, and Bacillus anthracis.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187194

Additional targets of the Bacillus subtilis global regulator CodY identified by chromatin immunoprecipitation and genome-wide transcript analysis

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187194

RelA protein is involved in induction of genetic competence in certain Bacillus subtilis strains by moderating the level of intracellular GTP.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187194

Bacillus subtilis CodY represses early-stationary-phase genes by sensing GTP levels

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187194

Transcriptional control of the low-temperature-inducible des gene, encoding the delta5 desaturase of Bacillus subtilis.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187194

Role of bkdR, a transcriptional activator of the sigL-dependent isoleucine and valine degradation pathway in Bacillus subtilis

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187194

Role and regulation of Bacillus subtilis glutamate dehydrogenase genes

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187194

An lrp-like gene of Bacillus subtilis involved in branched-chain amino acid transport

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187194

PCR-synthesis of marker cassettes with long flanking homology regions for gene disruptions in S. cerevisiae

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187194

Evidence that Bacillus subtilis sporulation induced by the stringent response is caused by the decrease in GTP or GDP.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187194

Complete analysis of cellular nucleotides by two-dimensional thin layer chromatography

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187194

Genetics and physiology of the rel system of Bacillus subtilis

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187194

Fatty Acid-requiring Mutant of Bacillus subtilis Defective in Branched Chain α-Keto Acid Dehydrogenase

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187194

Homeoviscous adaptation--a homeostatic process that regulates the viscosity of membrane lipids in Escherichia coli

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187194

Regulation of histidine and proline degradation enzymes by amino acid availability in Bacillus subtilis.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187194

A target for carbon source-dependent negative regulation of the citB promoter of Bacillus subtilis

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187194

Gene-protein relationships in the flagellar hook-basal body complex of Bacillus subtilis: sequences of the flgB, flgC, flgG, fliE and fliF genes

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187194

Identification of genes and gene products whose expression is activated during nitrogen-limited growth in Bacillus subtilis

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187194

The decrease of guanine nucleotides initiates sporulation of Bacillus subtilis

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187194

Characterization of the codY gene and its influence on biofilm formation in Bacillus cereus

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187194

Linking the nutritional status of Streptococcus pyogenes to alteration of transcriptional gene expression: the action of CodY and RelA.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187194

The structure of CodY, a GTP- and isoleucine-responsive regulator of stationary phase and virulence in gram-positive bacteria

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187194

Intracellular effectors regulating the activity of the Lactococcus lactis CodY pleiotropic transcription regulator.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187194

Guanine nucleotides guanosine 5'-diphosphate 3'-diphosphate and GTP co-operatively regulate the production of an antibiotic bacilysin in Bacillus subtilis

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187194

Effect of unusual guanosine nucleotides on the activities of some escherichia coli cellular enzymes

26 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21856856

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1128/JB.05510-11

1 reference

7 August 2017

1 reference

7 August 2017

1 reference