(Q35385135)

English

Online nanoflow reversed phase-strong anion exchange-reversed phase liquid chromatography-tandem mass spectrometry platform for efficient and in-depth proteome sequence analysis of complex organisms.

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scholarly article

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Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21851055%20AND%20SRC:MED&resulttype=core&format=json

11 February 2020

Online nanoflow reversed phase-strong anion exchange-reversed phase liquid chromatography-tandem mass spectrometry platform for efficient and in-depth proteome sequence analysis of complex organisms (English)

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Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21851055%20AND%20SRC:MED&resulttype=core&format=json

11 February 2020

liquid chromatography-tandem mass spectrometry

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James T. Webber

4

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Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21851055%20AND%20SRC:MED&resulttype=core&format=json

11 February 2020

author name string

Feng Zhou

1

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21851055%20AND%20SRC:MED&resulttype=core&format=json

11 February 2020

Timothy W Sikorski

2

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21851055%20AND%20SRC:MED&resulttype=core&format=json

11 February 2020

Scott B Ficarro

3

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21851055%20AND%20SRC:MED&resulttype=core&format=json

11 February 2020

Jarrod A Marto

5

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11 February 2020

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18 August 2011

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11 February 2020

Analytical Chemistry

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11 February 2020

83

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21851055%20AND%20SRC:MED&resulttype=core&format=json

11 February 2020

18

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21851055%20AND%20SRC:MED&resulttype=core&format=json

11 February 2020

6996-7005

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21851055%20AND%20SRC:MED&resulttype=core&format=json

11 February 2020

Highly sensitive proteome analysis of FACS-sorted adult colon stem cells

1 reference

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mzServer: web-based programmatic access for mass spectrometry data analysis

1 reference

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Online nanoflow RP-RP-MS reveals dynamics of multicomponent Ku complex in response to DNA damage

1 reference

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Proteomic analyses identify a diverse array of nuclear processes affected by small ubiquitin-like modifier conjugation in Arabidopsis

1 reference

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Decoding signalling networks by mass spectrometry-based proteomics

1 reference

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In vivo identification of sumoylation sites by a signature tag and cysteine-targeted affinity purification

1 reference

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Value of using multiple proteases for large-scale mass spectrometry-based proteomics

1 reference

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Workflow comparison for label-free, quantitative secretome proteomics for cancer biomarker discovery: method evaluation, differential analysis, and verification in serum

1 reference

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Comparison of extensive protein fractionation and repetitive LC-MS/MS analyses on depth of analysis for complex proteomes

1 reference

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27 July 2018

Proteomics of Saccharomyces cerevisiae Organelles

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3196608

27 July 2018

Comparative analysis of OFFGel, strong cation exchange with pH gradient, and RP at high pH for first-dimensional separation of peptides from a membrane-enriched protein fraction

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3196608

27 July 2018

Dual-pressure linear ion trap mass spectrometer improving the analysis of complex protein mixtures

1 reference

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27 July 2018

Full dynamic range proteome analysis of S. cerevisiae by targeted proteomics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3196608

27 July 2018

Magnetic bead processor for rapid evaluation and optimization of parameters for phosphopeptide enrichment.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3196608

27 July 2018

Improved electrospray ionization efficiency compensates for diminished chromatographic resolution and enables proteomics analysis of tyrosine signaling in embryonic stem cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3196608

27 July 2018

Fundamentals of traveling wave ion mobility spectrometry

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3196608

27 July 2018

Evaluation of strong cation exchange versus isoelectric focusing of peptides for multidimensional liquid chromatography-tandem mass spectrometry

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3196608

27 July 2018

Comprehensive mass-spectrometry-based proteome quantification of haploid versus diploid yeast

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3196608

27 July 2018

Comparison of two-dimensional fractionation techniques for shotgun proteomics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3196608

27 July 2018

Two-dimensional strong cation exchange/porous layer open tubular/mass spectrometry for ultratrace proteomic analysis using a 10 microm id poly(styrene- divinylbenzene) porous layer open tubular column with an on-line triphasic trapping column

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3196608

27 July 2018

Analysis of protein complexes using mass spectrometry

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3196608

27 July 2018

Determination of the sites of tyrosine O-sulfation in peptides and proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3196608

27 July 2018

Global, in vivo, and site-specific phosphorylation dynamics in signaling networks

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3196608

27 July 2018

An efficient tandem affinity purification procedure for interaction proteomics in mammalian cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3196608

27 July 2018

Dissecting the ubiquitin pathway by mass spectrometry

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3196608

27 July 2018

Multilectin affinity chromatography for characterization of multiple glycoprotein biomarker candidates in serum from breast cancer patients

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3196608

27 July 2018

Nucleolar proteome dynamics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3196608

27 July 2018

Global analysis of protein expression in yeast

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3196608

27 July 2018

A proteomics approach to understanding protein ubiquitination

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3196608

27 July 2018

Evaluation of multidimensional chromatography coupled with tandem mass spectrometry (LC/LC-MS/MS) for large-scale protein analysis: the yeast proteome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3196608

27 July 2018

Phosphoproteome analysis by mass spectrometry and its application to Saccharomyces cerevisiae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3196608

27 July 2018

Analysis of viral glycoproteins by MALDI-TOF mass spectrometry

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3196608

27 July 2018

Direct analysis of protein complexes using mass spectrometry

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3196608

27 July 2018

A microcapillary column switching HPLC-electrospray ionization MS system for the direct identification of peptides presented by major histocompatibility complex class I molecules

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3196608

27 July 2018

Mass Spectrometric Sequencing of Proteins from Silver-Stained Polyacrylamide Gels

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3196608

27 July 2018

Analytical properties of the nanoelectrospray ion source

1 reference

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Femtomole sequencing of proteins from polyacrylamide gels by nano-electrospray mass spectrometry

1 reference

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Zwitterionic hydrophilic interaction liquid chromatography (ZIC-HILIC and ZIC-cHILIC) provide high resolution separation and increase sensitivity in proteome analysis

1 reference

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Mass spectrometry in high-throughput proteomics: ready for the big time.

1 reference

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Shotgun proteome analysis utilising mixed mode (reversed phase-anion exchange chromatography) in conjunction with reversed phase liquid chromatography mass spectrometry analysis

1 reference

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Proteome-wide analysis of protein carboxy termini: C terminomics

1 reference

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Isotopic labeling of terminal amines in complex samples identifies protein N-termini and protease cleavage products

1 reference

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26 September 2018

Quantitative analysis of proteome coverage and recovery rates for upstream fractionation methods in proteomics.

1 reference

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Glycoprotein analysis using protein microarrays and mass spectrometry

1 reference

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Reversed-phase-reversed-phase liquid chromatography approach with high orthogonality for multidimensional separation of phosphopeptides

1 reference

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Performance metrics for liquid chromatography-tandem mass spectrometry systems in proteomics analyses

1 reference

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1 reference

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Alignment of capillary electrophoresis-mass spectrometry datasets using accurate mass information.

1 reference

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Repeatability of peptide identifications in shotgun proteome analysis employing off-line two-dimensional chromatographic separations and ion-trap MS.

1 reference

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Peptide separation with immobilized pI strips is an attractive alternative to in-gel protein digestion for proteome analysis

1 reference

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26 September 2018

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1 reference

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Organellar proteomics: turning inventories into insights

1 reference

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26 September 2018

Orthogonality of separation in two-dimensional liquid chromatography.

1 reference

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26 September 2018

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1 reference

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26 September 2018

Immobilized pH gradients as a first dimension in shotgun proteomics and analysis of the accuracy of pI predictability of peptides

1 reference

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Ultra-high-efficiency strong cation exchange LC/RPLC/MS/MS for high dynamic range characterization of the human plasma proteome.

1 reference

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26 September 2018

A method for the comprehensive proteomic analysis of membrane proteins

1 reference

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1 reference

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26 September 2018

Large-scale analysis of the yeast proteome by multidimensional protein identification technology

1 reference

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1 reference

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1 reference

https://pubmed.ncbi.nlm.nih.gov/21851055

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Two-dimensional separations: concept and promise

1 reference

https://pubmed.ncbi.nlm.nih.gov/21851055

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Semiautomated high-sensitivity profiling of human blood serum glycoproteins through lectin preconcentration and multidimensional chromatography/tandem mass spectrometry

1 reference

https://pubmed.ncbi.nlm.nih.gov/21851055

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Signal suppression in electrospray ionization Fourier transform mass spectrometry of multi-component samples

1 reference

https://pubmed.ncbi.nlm.nih.gov/21851055

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Evaluation of confidence and reproducibility in quantitative proteomics performed by a capillary isoelectric focusing-based proteomic platform coupled with a spectral counting approach

1 reference

https://pubmed.ncbi.nlm.nih.gov/21851055

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Development of online high-/low-pH reversed-phase-reversed-phase two-dimensional liquid chromatography for shotgun proteomics: a reversed-phase-strong cation exchange-reversed-phase approach

1 reference

https://pubmed.ncbi.nlm.nih.gov/21851055

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1021/AC200639V

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21851055%20AND%20SRC:MED&resulttype=core&format=json

11 February 2020

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21851055%20AND%20SRC:MED&resulttype=core&format=json

11 February 2020

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21851055%20AND%20SRC:MED&resulttype=core&format=json

11 February 2020

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