(Q35567978)

English

RecA can stimulate the relaxation activity of topoisomerase I: Molecular basis of topoisomerase-mediated genome-wide transcriptional responses in Escherichia coli

scientific article published on 6 December 2006

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scholarly article

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Europe PubMed Central

PubMed publication ID

8 August 2017

RecA can stimulate the relaxation activity of topoisomerase I: Molecular basis of topoisomerase-mediated genome-wide transcriptional responses in Escherichia coli (English)

1 reference

Europe PubMed Central

PubMed publication ID

8 August 2017

Escherichia coli

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author name string

Amy R Reckinger

1

1 reference

Europe PubMed Central

PubMed publication ID

8 August 2017

Kyeong Soo Jeong

2

1 reference

Europe PubMed Central

PubMed publication ID

8 August 2017

Arkady B Khodursky

3

1 reference

Europe PubMed Central

PubMed publication ID

8 August 2017

Hiroshi Hiasa

4

1 reference

Europe PubMed Central

PubMed publication ID

8 August 2017

language of work or name

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publication date

6 December 2006

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Europe PubMed Central

PubMed publication ID

8 August 2017

Nucleic Acids Research

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Europe PubMed Central

PubMed publication ID

8 August 2017

35

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Europe PubMed Central

PubMed publication ID

8 August 2017

1

1 reference

Europe PubMed Central

PubMed publication ID

8 August 2017

79-86

1 reference

Europe PubMed Central

PubMed publication ID

8 August 2017

Analysis of pleiotropic transcriptional profiles: a case study of DNA gyrase inhibition

1 reference

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12 July 2018

Norfloxacin-induced DNA gyrase cleavage complexes block Escherichia coli replication forks, causing double-stranded breaks in vivo

1 reference

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12 July 2018

Interaction network containing conserved and essential protein complexes in Escherichia coli

1 reference

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12 July 2018

Genomic transcriptional response to loss of chromosomal supercoiling in Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1761438

12 July 2018

Spatial patterns of transcriptional activity in the chromosome of Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1761438

12 July 2018

The Bacterial RecA Protein as a Motor Protein

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1761438

12 July 2018

A microarray-based antibiotic screen identifies a regulatory role for supercoiling in the osmotic stress response of Escherichia coli

1 reference

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12 July 2018

The Y-family of DNA polymerases

1 reference

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12 July 2018

DNA topoisomerases: structure, function, and mechanism

1 reference

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12 July 2018

Analysis of topoisomerase function in bacterial replication fork movement: use of DNA microarrays

1 reference

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12 July 2018

The importance of repairing stalled replication forks

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1761438

12 July 2018

RecA protein: structure, function, and role in recombinational DNA repair

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1761438

12 July 2018

A novel, double mutation in DNA gyrase A of Escherichia coli conferring resistance to quinolone antibiotics.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1761438

12 July 2018

DNA topoisomerases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1761438

12 July 2018

The role of the carboxyl-terminal amino acid residues in Escherichia coli DNA topoisomerase III-mediated catalysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1761438

12 July 2018

The carboxyl-terminal residues of Escherichia coli DNA topoisomerase III are involved in substrate binding

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1761438

12 July 2018

The helicity of DNA in complexes with recA protein

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1761438

12 July 2018

Mechanism of Action of Nalidixic Acid on Escherichia coli III. Conditions Required for Lethality

1 reference

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12 July 2018

Interaction between DNA and an Escherichia coli protein omega

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1761438

12 July 2018

Properties of the duplex DNA-dependent ATPase activity of Escherichia coli RecA protein and its role in branch migration

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1761438

12 July 2018

Fusions of the Escherichia coli gyrA and gyrB control regions to the galactokinase gene are inducible by coumermycin treatment

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1761438

12 July 2018

Structure of helical RecA-DNA complexes. Complexes formed in the presence of ATP-gamma-S or ATP.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1761438

12 July 2018

Visualization of RecA protein and its complexes with DNA by quick-freeze/deep-etch electron microscopy

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1761438

12 July 2018

Use of T7 RNA polymerase to direct expression of cloned genes

1 reference

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12 July 2018

Assembly and disassembly of RecA protein filaments occur at opposite filament ends. Relationship to DNA strand exchange.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1761438

12 July 2018

New topoisomerase essential for chromosome segregation in E. coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1761438

12 July 2018

Mechanism of DNA A protein-dependent pBR322 DNA replication. DNA A protein-mediated trans-strand loading of the DNA B protein at the origin of pBR322 DNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1761438

12 July 2018

Coordinated leading- and lagging-strand synthesis at the Escherichia coli DNA replication fork. I. Multiple effectors act to modulate Okazaki fragment size

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1761438

12 July 2018

Structural data suggest that the active and inactive forms of the RecA filament are not simply interconvertible

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1761438

12 July 2018

The role of topoisomerase IV in partitioning bacterial replicons and the structure of catenated intermediates in DNA replication

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1761438

12 July 2018

DNA gyrase on the bacterial chromosome: DNA cleavage induced by oxolinic acid

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1761438

12 July 2018

DNA gyrase: an enzyme that introduces superhelical turns into DNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1761438

12 July 2018

Lethal action of quinolones against a temperature-sensitive dnaB replication mutant of Escherichia coli.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1761438

26 September 2018

Replication restart in gyrB Escherichia coli mutants

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1761438

26 September 2018

C-terminal deletions of the Escherichia coli RecA protein. Characterization of in vivo and in vitro effects

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1761438

26 September 2018

Magnesium ion-dependent activation of the RecA protein involves the C terminus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1761438

26 September 2018

DNA strand cleavage is required for replication fork arrest by a frozen topoisomerase-quinolone-DNA ternary complex.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1761438

26 September 2018

Decatenating activity of Escherichia coli DNA gyrase and topoisomerases I and III during oriC and pBR322 DNA replication in vitro.

1 reference

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26 September 2018

Primase couples leading- and lagging-strand DNA synthesis from oriC.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1761438

26 September 2018

Topoisomerase mutations affect the relative abundance of many Escherichia coli proteins.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1761438

26 September 2018

Replication of pBR322 DNA in vitro with purified proteins. Requirement for topoisomerase I in the maintenance of template specificity

1 reference

https://pubmed.ncbi.nlm.nih.gov/17151069

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

DNA gyrase-mediated wrapping of the DNA strand is required for the replication fork arrest by the DNA gyrase-quinolone-DNA ternary complex

1 reference

https://pubmed.ncbi.nlm.nih.gov/17151069

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

RecA protein filaments disassemble in the 5' to 3' direction on single-stranded DNA

1 reference

https://pubmed.ncbi.nlm.nih.gov/17151069

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Characterization of complexes between recA protein and duplex DNA by electron microscopy

1 reference

https://pubmed.ncbi.nlm.nih.gov/17151069

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Gene splicing by overlap extension

1 reference

https://pubmed.ncbi.nlm.nih.gov/17151069

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The direction of RecA protein assembly onto single strand DNA is the same as the direction of strand assimilation during strand exchange

1 reference

https://pubmed.ncbi.nlm.nih.gov/17151069

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identification of a potent decatenating enzyme from Escherichia coli

1 reference

https://pubmed.ncbi.nlm.nih.gov/17151069

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Multiple promoters for transcription of the Escherichia coli DNA topoisomerase I gene and their regulation by DNA supercoiling

1 reference

https://pubmed.ncbi.nlm.nih.gov/17151069

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

General mechanism for RecA protein binding to duplex DNA

1 reference

https://pubmed.ncbi.nlm.nih.gov/17151069

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Extent of duplex DNA underwinding induced by RecA protein binding in the presence of ATP

1 reference

https://pubmed.ncbi.nlm.nih.gov/17151069

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Tus prevents overreplication of oriC plasmid DNA

1 reference

https://pubmed.ncbi.nlm.nih.gov/17151069

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

RecA protein filaments: end-dependent dissociation from ssDNA and stabilization by RecO and RecR proteins

1 reference

https://pubmed.ncbi.nlm.nih.gov/17151069

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Roles of topoisomerases in maintaining steady-state DNA supercoiling in Escherichia coli

1 reference

https://pubmed.ncbi.nlm.nih.gov/17151069

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1093/NAR/GKL981

1 reference

Europe PubMed Central

PubMed publication ID

8 August 2017

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

8 August 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

8 August 2017

ResearchGate publication ID

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