(Q35618038)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25924884%20AND%20SRC:MED&resulttype=core&format=json

7 March 2020

title

UrQt: an efficient software for the Unsupervised Quality trimming of NGS data (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25924884%20AND%20SRC:MED&resulttype=core&format=json

7 March 2020

0 references

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25924884%20AND%20SRC:MED&resulttype=core&format=json

7 March 2020

author name string

Laurent Modolo

series ordinal

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25924884%20AND%20SRC:MED&resulttype=core&format=json

7 March 2020

publication date

29 April 2015

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25924884%20AND%20SRC:MED&resulttype=core&format=json

7 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25924884%20AND%20SRC:MED&resulttype=core&format=json

7 March 2020

volume

16

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25924884%20AND%20SRC:MED&resulttype=core&format=json

7 March 2020

page(s)

137

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25924884%20AND%20SRC:MED&resulttype=core&format=json

Creative Commons Attribution 4.0 International

7 March 2020

copyright license

start time

29 April 2015

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

An extensive evaluation of read trimming effects on Illumina NGS data analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4450468

Fast gapped-read alignment with Bowtie 2

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4450468

High-quality draft assemblies of mammalian genomes from massively parallel sequence data

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4450468

Quake: quality-aware detection and correction of sequencing errors

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4450468

Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4450468

The Sanger FASTQ file format for sequences with quality scores, and the Solexa/Illumina FASTQ variants

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4450468

Fast and accurate short read alignment with Burrows-Wheeler transform

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4450468

Galaxy: a platform for interactive large-scale genome analysis

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4450468

Circular binary segmentation for the analysis of array-based DNA copy number data

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4450468

Base-calling of automated sequencer traces using phred. II. Error probabilities

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4450468

Base-calling of automated sequencer traces using phred. I. Accuracy assessment

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4450468

Nomenclature for incompletely specified bases in nucleic acid sequences: recommendations 1984.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4450468

Trimmomatic: a flexible trimmer for Illumina sequence data

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4450468

Statistical Analyses of Next Generation Sequence Data: A Partial Overview

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4450468

Galaxy: a web-based genome analysis tool for experimentalists

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4450468

Cutadapt removes adapter sequences from high-throughput sequencing reads

25 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.1186%2FS12859-015-0546-8

10.1186/S12859-015-0546-8

21 January 2018

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25924884%20AND%20SRC:MED&resulttype=core&format=json

7 March 2020

DBLP publication ID

journals/bmcbi/ModoloL15

1 reference

DBLP Dataset 2021-01-02

release_3bmjk4txzbeuxkqgewdk5qwf34

28 January 2021

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/3bmjk4txzbeuxkqgewdk5qwf34

mapped directly with Wikidata item

24 November 2022

based on heuristic

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25924884%20AND%20SRC:MED&resulttype=core&format=json

7 March 2020

PubMed publication ID

25924884

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25924884%20AND%20SRC:MED&resulttype=core&format=json