(Q35642122)

9 August 2017

title

An important base triple anchors the substrate helix recognition surface within the Tetrahymena ribozyme active site (English)

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9 August 2017

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A A Szewczak

1

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9 August 2017

L Ortoleva-Donnelly

2

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9 August 2017

M V Zivarts

3

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9 August 2017

A K Oyelere

4

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9 August 2017

A V Kazantsev

5

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9 August 2017

S A Strobel

6

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9 August 2017

language of work or name

English

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publication date

1 September 1999

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Proceedings of the National Academy of Sciences of the United States of America

9 August 2017

number of pages

6

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based on heuristic

inferred from page(s)

published in

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9 August 2017

volume

96

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9 August 2017

issue

20

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9 August 2017

page(s)

11183-11188

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A minor groove RNA triple helix within the catalytic core of a group I intron

9 August 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=18008

A preorganized active site in the crystal structure of the Tetrahymena ribozyme

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=18008

The chemical basis of adenosine conservation throughout the Tetrahymena ribozyme

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=18008

NMR evidence for a base triple in the HIV-2 TAR C-G.C+ mutant-argininamide complex

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=18008

Mutagenesis and comparative sequence analysis of a base triple joining the two domains of group I ribozymes

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=18008

Defining the chemical groups essential for Tetrahymena group I intron function by nucleotide analog interference mapping

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=18008

Joining the two domains of a group I ribozyme to form the catalytic core

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=18008

A comparative database of group I intron structures

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=18008

Movement of the guide sequence during RNA catalysis by a group I ribozyme

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=18008

Sequence-specific cleavage of double helical DNA by triple helix formation.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=18008

Sequence-specific endoribonuclease activity of the Tetrahymena ribozyme: enhanced cleavage of certain oligonucleotide substrates that form mismatched ribozyme-substrate complexes

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=18008

The guanosine binding site of the Tetrahymena ribozyme

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=18008

Defining the inside and outside of a catalytic RNA molecule

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=18008

Catalysis of RNA cleavage by the Tetrahymena thermophila ribozyme. 1. Kinetic description of the reaction of an RNA substrate complementary to the active site

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=18008

Modelling of the three-dimensional architecture of group I catalytic introns based on comparative sequence analysis

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=18008

Ribozyme-catalyzed and nonenzymatic reactions of phosphate diesters: rate effects upon substitution of sulfur for a nonbridging phosphoryl oxygen atom

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=18008

Ribozyme recognition of RNA by tertiary interactions with specific ribose 2′-OH groups

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=18008

RNA catalysis by a group I ribozyme. Developing a model for transition state stabilization

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=18008

RNA substrate binding site in the catalytic core of the Tetrahymena ribozyme

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=18008

DNA sequencing with chain-terminating inhibitors

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=18008

The importance of being ribose at the cleavage site in the Tetrahymena ribozyme reaction

27 July 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.96.20.11183

A mutant T7 RNA polymerase as a DNA polymerase.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=18008

Complementary sets of noncanonical base pairs mediate RNA helix packing in the group I intron active site

25 September 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.96.20.11183

Directed evolution of an RNA enzyme

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=18008

Dynamics of ribozyme binding of substrate revealed by fluorescence-detected stopped-flow methods

23 October 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.96.20.11183

Assessment of a model for intron RNA secondary structure relevant to RNA self-splicing — a review

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.96.20.11183

9 Specific labeling of 3′ termini of RNA with T4 RNA ligase

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.96.20.11183

Thermodynamic and activation parameters for binding of a pyrene-labeled substrate by the Tetrahymena ribozyme: docking is not diffusion-controlled and is driven by a favorable entropy change

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.96.20.11183

21 January 2018

Identifiers

DOI

10.1073/PNAS.96.20.11183

1 reference

9 August 2017

0 references

1 reference

9 August 2017

1 reference