(Q35672247)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21948798%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

title

Nucleosome occupancy reveals regulatory elements of the CFTR promoter (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21948798%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

4

1 reference

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13 February 2020

Shih-Hsing Leir

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21948798%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

author name string

Christopher J Ott

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21948798%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

Jared M Bischof

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21948798%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

Kristen M Unti

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21948798%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

Ann Harris

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21948798%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

language of work or name

English

0 references

publication date

24 September 2011

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21948798%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

number of pages

13

1 reference

inferred from page(s)

published in

Nucleic Acids Research

1 reference

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13 February 2020

volume

40

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21948798%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

issue

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21948798%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

page(s)

625-637

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21948798%20AND%20SRC:MED&resulttype=core&format=json

Creative Commons Attribution-NonCommercial 3.0 Unported

13 February 2020

copyright license

start time

7 November 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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Genomic approaches for the discovery of CFTR regulatory elements

12 July 2018

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Lack of cystic fibrosis transmembrane conductance regulator in CD3+ lymphocytes leads to aberrant cytokine secretion and hyperinflammatory adaptive immune responses

12 July 2018

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Comprehensive analysis of the palindromic motif TCTCGCGAGA: a regulatory element of the HNRNPK promoter

12 July 2018

1 reference

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Predicting nucleosome positioning using a duration Hidden Markov Model

12 July 2018

1 reference

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Cell-type-specific long-range looping interactions identify distant regulatory elements of the CFTR gene

12 July 2018

1 reference

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Nucleosome dynamics define transcriptional enhancers

12 July 2018

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Chromatin remodelling during development

12 July 2018

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Intronic enhancers coordinate epithelial-specific looping of the active CFTR locus

12 July 2018

1 reference

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From DNA sequence to transcriptional behaviour: a quantitative approach

12 July 2018

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A complex intronic enhancer regulates expression of the CFTR gene by direct interaction with the promoter

12 July 2018

1 reference

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Poly(dA:dT) tracts: major determinants of nucleosome organization

12 July 2018

1 reference

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Nucleosome positioning and gene regulation: advances through genomics

12 July 2018

1 reference

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The DNA-encoded nucleosome organization of a eukaryotic genome

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258145

Generation of a conditional null allele for Cftr in mice

12 July 2018

1 reference

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A barrier nucleosome model for statistical positioning of nucleosomes throughout the yeast genome

12 July 2018

1 reference

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A high-resolution, nucleosome position map of C. elegans reveals a lack of universal sequence-dictated positioning

12 July 2018

1 reference

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Dynamic regulation of nucleosome positioning in the human genome

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258145

High-resolution mapping and characterization of open chromatin across the genome

12 July 2018

1 reference

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First functional polymorphism in CFTR promoter that results in decreased transcriptional activity and Sp1/USF binding.

12 July 2018

1 reference

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Binding of serum response factor to cystic fibrosis transmembrane conductance regulator CArG-like elements, as a new potential CFTR transcriptional regulation pathway.

12 July 2018

1 reference

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Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes

12 July 2018

1 reference

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HNF1alpha is involved in tissue-specific regulation of CFTR gene expression

12 July 2018

1 reference

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NF-kappa B mediates up-regulation of CFTR gene expression in Calu-3 cells by interleukin-1beta

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258145

Analysis of a DNase I hypersensitive site located -20.9 kb upstream of the CFTR gene

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258145

Analysis of DNase-I-hypersensitive sites at the 3' end of the cystic fibrosis transmembrane conductance regulator gene (CFTR).

12 July 2018

1 reference

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Characterization of the cAMP response element of the cystic fibrosis transmembrane conductance regulator gene promoter

12 July 2018

1 reference

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A regulatory element in intron 1 of the cystic fibrosis transmembrane conductance regulator gene

12 July 2018

1 reference

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DNA-binding specificities of the GATA transcription factor family

12 July 2018

1 reference

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SV40-induced immortalization and ras-transformation of human bronchial epithelial cells.

12 July 2018

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Characterization of the cystic fibrosis transmembrane conductance regulator promoter region. Chromatin context and tissue-specificity.

12 July 2018

1 reference

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Basal expression of the cystic fibrosis transmembrane conductance regulator gene is dependent on protein kinase A activity

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258145

Characterization of DNASE I hypersensitive sites in the 120kb 5' to the CFTR gene

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258145

Expression of the cystic fibrosis gene in adult human lung

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258145

Localization of cystic fibrosis transmembrane conductance regulator mRNA in the human gastrointestinal tract by in situ hybridization

12 July 2018

1 reference

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Transcription of cystic fibrosis transmembrane conductance regulator requires a CCAAT-like element for both basal and cAMP-mediated regulation.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258145

A human cell line from a pleural effusion derived from a breast carcinoma

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258145

Analysis of liver/bone/kidney alkaline phosphatase mRNA, DNA, and enzymatic activity in cultured skin fibroblasts from 14 unrelated patients with severe hypophosphatasia.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258145

Expression of the cystic fibrosis gene in human development

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258145

Characterization of the promoter region of the cystic fibrosis transmembrane conductance regulator gene

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258145

Immunocytochemical localization of the cystic fibrosis gene product CFTR

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258145

The cystic fibrosis gene has a "housekeeping"-type promoter and is expressed at low levels in cells of epithelial origin.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258145

Absence of HeLa cell contamination in 169 cell lines derived from human tumors

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258145

Multiple mechanisms influence regulation of the cystic fibrosis transmembrane conductance regulator gene promoter

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258145

Characterization of wild-type and deltaF508 cystic fibrosis transmembrane regulator in human respiratory epithelia

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258145

Evaluation of potential regulatory elements identified as DNase I hypersensitive sites in the CFTR gene

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258145

Cystic fibrosis transmembrane conductance regulator expression in human hypothalamus

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258145

CFTR expression and chloride secretion in polarized immortal human bronchial epithelial cells

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258145

A naturally occurring sequence variation that creates a YY1 element is associated with increased cystic fibrosis transmembrane conductance regulator gene expression

25 September 2018

1 reference

12 December 2020

Beta-adrenergic receptors on human tracheal epithelial cells in primary culture

1 reference

12 December 2020

Tissue-specific in vivo transcription start sites of the human and murine cystic fibrosis genes

1 reference

12 December 2020

Transcriptional repression of the cystic fibrosis transmembrane conductance regulator gene, mediated by CCAAT displacement protein/cut homolog, is associated with histone deacetylation

1 reference

12 December 2020

Complex allele [-102T>A+S549R(T>G)] is associated with milder forms of cystic fibrosis than allele S549R(T>G) alone

1 reference

12 December 2020

Variants in CFTR untranslated regions are associated with congenital bilateral absence of the vas deferens

1 reference

12 December 2020

Multiple potential intragenic regulatory elements in the CFTR gene

1 reference

12 December 2020

Identifiers

DOI

10.1093/NAR/GKR754

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21948798%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21948798%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

PubMed publication ID

21948798

1 reference