(Q35721580)

9 August 2017

title

Knowledge-based reconstruction of mRNA transcripts with short sequencing reads for transcriptome research (English)

1 reference

9 August 2017

Junhee Seok

1

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9 August 2017

Weihong Xu

2

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9 August 2017

Hui Jiang

3

1 reference

9 August 2017

Ronald W Davis

4

1 reference

9 August 2017

Wenzhong Xiao

5

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9 August 2017

language of work or name

English

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publication date

1 February 2012

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9 August 2017

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9 August 2017

volume

7

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9 August 2017

issue

2

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9 August 2017

page(s)

e31440

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Creative Commons Attribution 4.0 International

9 August 2017

copyright license

start time

1 February 2012

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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1 reference

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Human transcriptome array for high-throughput clinical studies.

12 July 2018

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The sequence read archive

12 July 2018

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12 July 2018

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Discovery of non-ETS gene fusions in human prostate cancer using next-generation RNA sequencing

12 July 2018

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Detection of splice junctions from paired-end RNA-seq data by SpliceMap.

12 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3270033

Understanding mechanisms underlying human gene expression variation with RNA sequencing

12 July 2018

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Targeted next-generation sequencing of a cancer transcriptome enhances detection of sequence variants and novel fusion transcripts

12 July 2018

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Identifiability of isoform deconvolution from junction arrays and RNA-Seq.

12 July 2018

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ABySS: a parallel assembler for short read sequence data

12 July 2018

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Statistical inferences for isoform expression in RNA-Seq

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3270033

QSRA: a quality-value guided de novo short read assembler

12 July 2018

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RNA-Seq: a revolutionary tool for transcriptomics

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3270033

Alternative isoform regulation in human tissue transcriptomes

12 July 2018

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SeqMap: mapping massive amount of oligonucleotides to the genome

12 July 2018

1 reference

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Mapping and quantifying mammalian transcriptomes by RNA-Seq

12 July 2018

1 reference

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Velvet: algorithms for de novo short read assembly using de Bruijn graphs

12 July 2018

1 reference

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ALLPATHS: de novo assembly of whole-genome shotgun microreads

12 July 2018

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Splicing in disease: disruption of the splicing code and the decoding machinery

12 July 2018

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NCBI reference sequences (RefSeq): a curated non-redundant sequence database of genomes, transcripts and proteins

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3270033

Understanding alternative splicing: towards a cellular code

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3270033

Finishing the euchromatic sequence of the human genome

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3270033

Novel RNAs identified from an in-depth analysis of the transcriptome of human chromosomes 21 and 22

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3270033

Transcriptome and genome conservation of alternative splicing events in humans and mice.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3270033

Comparative analyses of multi-species sequences from targeted genomic regions

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3270033

The UCSC Genome Browser Database

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3270033

Prediction of complete gene structures in human genomic DNA

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3270033

Complementary DNA sequencing: expressed sequence tags and human genome project

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3270033

12 July 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0031440

Identification of novel transcripts in annotated genomes using RNA-Seq

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0031440

10.1371/JOURNAL.PONE.0031440

21 January 2018

Identifiers

DOI

1 reference

9 August 2017

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9 August 2017

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