(Q35742369)

10 August 2017

title

Gyrase inhibitors induce an oxidative damage cellular death pathway in Escherichia coli (English)

1 reference

10 August 2017

1 reference

Daniel J Dwyer

1

1 reference

10 August 2017

Michael A Kohanski

series ordinal

2

1 reference

10 August 2017

Boris Hayete

series ordinal

3

1 reference

10 August 2017

James J Collins

series ordinal

4

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10 August 2017

publication date

13 March 2007

1 reference

Molecular Systems Biology

10 August 2017

published in

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10 August 2017

volume

3

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10 August 2017

page(s)

91

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Large-scale mapping and validation of Escherichia coli transcriptional regulation from a compendium of expression profiles

10 August 2017

cites work

1 reference

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IscR-dependent gene expression links iron-sulphur cluster assembly to the control of O2-regulated genes in Escherichia coli.

27 July 2018

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Iron-sulphur clusters and the problem with oxygen

27 July 2018

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27 July 2018

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Structure, function, and formation of biological iron-sulfur clusters

27 July 2018

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Calcium, ATP, and ROS: a mitochondrial love-hate triangle

27 July 2018

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Engineered riboregulators enable post-transcriptional control of gene expression

27 July 2018

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The evolution of genetic regulatory systems in bacteria

27 July 2018

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The Gene Ontology Annotation (GOA) Database: sharing knowledge in Uniprot with Gene Ontology

27 July 2018

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Pathways of Oxidative Damage

27 July 2018

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Exploration, normalization, and summaries of high density oligonucleotide array probe level data

27 July 2018

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Bacterial iron homeostasis

27 July 2018

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Mechanism of superoxide and hydrogen peroxide formation by fumarate reductase, succinate dehydrogenase, and aspartate oxidase.

27 July 2018

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Structural biology of bacterial iron uptake systems

27 July 2018

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IscR, an Fe-S cluster-containing transcription factor, represses expression of Escherichia coli genes encoding Fe-S cluster assembly proteins.

27 July 2018

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Managing DNA polymerases: coordinating DNA replication, DNA repair, and DNA recombination

27 July 2018

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DNA topoisomerases: structure, function, and mechanism

27 July 2018

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Role of reactive oxygen species (ROS) in apoptosis induction

27 July 2018

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Biogenesis of iron-sulfur proteins in eukaryotes: a novel task of mitochondria that is inherited from bacteria

27 July 2018

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Gene ontology: tool for the unification of biology

27 July 2018

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Superoxide and iron: partners in crime

27 July 2018

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Oxygen stress: a regulator of apoptosis in yeast

27 July 2018

1 reference

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Sequence-specific DNA cleavage by Fe2+-mediated fenton reactions has possible biological implications

27 July 2018

1 reference

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Mitochondria and apoptosis

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1847949

DNA strand breaking by the hydroxyl radical is governed by the accessible surface areas of the hydrogen atoms of the DNA backbone

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1847949

Modulation of gyrase-mediated DNA cleavage and cell killing by ATP.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1847949

Assembly of iron-sulfur clusters. Identification of an iscSUA-hscBA-fdx gene cluster from Azotobacter vinelandii

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1847949

The redox-regulated SoxR protein acts from a single DNA site as a repressor and an allosteric activator

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1847949

DNA gyrase, topoisomerase IV, and the 4-quinolones

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1847949

Superoxide Anion Radical (O·̄2), Superoxide Dismutases, and Related Matters

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1847949

Independent and tight regulation of transcriptional units in Escherichia coli via the LacR/O, the TetR/O and AraC/I1-I2 regulatory elements

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1847949

Regulation of the soxRS oxidative stress regulon. Reversible oxidation of the Fe-S centers of SoxR in vivo

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1847949

Superoxide accelerates DNA damage by elevating free-iron levels

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1847949

The role of iron-sulfur clusters in in vivo hydroxyl radical production

27 July 2018

1 reference

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Reactive oxygen species and programmed cell death

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1847949

27 July 2018

1 reference

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FACS-optimized mutants of the green fluorescent protein (GFP)

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1847949

Lethal oxidative damage and mutagenesis are generated by iron in delta fur mutants of Escherichia coli: protective role of superoxide dismutase

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1847949

Sequential reduction of mitochondrial transmembrane potential and generation of reactive oxygen species in early programmed cell death

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1847949

The SOS regulatory system of Escherichia coli

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1847949

DNA-damaging agents stimulate gene expression at specific loci in Escherichia coli

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1847949

Mutagenesis and inducible responses to deoxyribonucleic acid damage in Escherichia coli

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1847949

Evolution of cellular ATP concentration after UV-mediated induction of SOS system in Escherichiacoli

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1847949

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1847949

DNA gyrase subunit stoichiometry and the covalent attachment of subunit A to DNA during DNA cleavage

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1847949

DNA Gyrase and the Supercoiling of DNA

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1847949

The U.V. sensitivity of bacteria: its relation to the DNA replication cycle

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1847949

Marker-specific effects in genetic recombination

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1847949

Fine-Structure Deletion Map of the Escherichia coli L-Arabinose Operon

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1847949

Effects of the ccd function of the F plasmid on bacterial growth

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1847949

DNA damage and oxygen radical toxicity

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1847949

Toxic DNA damage by hydrogen peroxide through the Fenton reaction in vivo and in vitro

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1847949

Effects of metal ion chelators on DNA strand breaks and inactivation produced by hydrogen peroxide in Escherichia coli: detection of iron-independent lesions

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1847949

Mechanism of specific LexA cleavage: autodigestion and the role of RecA coprotease

27 July 2018

1 reference

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Oxidative stress responses in Escherichia coli and Salmonella typhimurium

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1847949

DNA gyrase: structure and function.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1847949

Cell killing by the F plasmid CcdB protein involves poisoning of DNA-topoisomerase II complexes

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1847949

Modulation of DNA supercoiling activity of Escherichia coli DNA gyrase by F plasmid proteins. Antagonistic actions of LetA (CcdA) and LetD (CcdB) proteins

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1847949

Control of segregation of chromosomal DNA by sex factor F in Escherichia coli. Mutants of DNA gyrase subunit A suppress letD (ccdB) product growth inhibition

27 July 2018

1 reference

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Ultraviolet mutagenesis and inducible DNA repair in Escherichia coli

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1847949

Protein X is the product of the recA gene of Escherichia coli

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1847949

Escherichia coli Mutants Thermosensitive for Deoxyribonucleic Acid Gyrase Subunit A: Effects on Deoxyribonucleic Acid Replication, Transcription, and Bacteriophage Growth

27 July 2018

1 reference

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DNA gyrase: an enzyme that introduces superhelical turns into DNA

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1847949

DNA gyrase: subunit structure and ATPase activity of the purified enzyme

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1847949

Repair of oxidized iron-sulfur clusters in Escherichia coli

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1847949

GO::TermFinder--open source software for accessing Gene Ontology information and finding significantly enriched Gene Ontology terms associated with a list of genes

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1847949

A suf operon requirement for Fe-S cluster assembly during iron starvation in Escherichia coli

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1847949

RecA-Dependent Recovery of Arrested DNA Replication Forks

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1847949

Global iron-dependent gene regulation in Escherichia coli. A new mechanism for iron homeostasis.

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1847949

Development of novel fluorescence probes that can reliably detect reactive oxygen species and distinguish specific species

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1847949

Localization of Fe(2+) at an RTGR sequence within a DNA duplex explains preferential cleavage by Fe(2+) and H2O2.

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1847949

The cysteine desulfurase, IscS, has a major role in in vivo Fe-S cluster formation in Escherichia coli

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1847949

The importance of repairing stalled replication forks

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1847949

Iron and oxidative stress in bacteria

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1847949

Opening the iron box: transcriptional metalloregulation by the Fur protein.

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1847949

DNA gyrase and topoisomerase IV on the bacterial chromosome: quinolone-induced DNA cleavage.

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1847949

The F plasmid CcdB protein induces efficient ATP-dependent DNA cleavage by gyrase.

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1847949

The inactivation of Fe-S cluster containing hydro-lyases by superoxide.

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1847949

The importance of oxygen in the killing of bacteria by ofloxacin and ciprofloxacin.

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1847949

The complex of DNA gyrase and quinolone drugs with DNA forms a barrier to transcription by RNA polymerase.

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1847949

Combining probability from independent tests: the weighted Z-method is superior to Fisher's approach

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1847949

The interaction of the F plasmid killer protein, CcdB, with DNA gyrase: induction of DNA cleavage and blocking of transcription 1 1J. Karn

15 November 2018

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12 December 2020

Where will new antibiotics come from?

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12 December 2020

The inhibition of mitochondrial respiration by 1,10-phenanthroline and 2,2'-bipyridine and the possible relationship to oxidative phosphorylation

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12 December 2020

Overlapping and separate controls on the phosphate regulon in Escherichia coli K12

1 reference

12 December 2020

Mutagenic spectrum resulting from DNA damage by oxygen radicals

1 reference

12 December 2020

Superoxide production by respiring membranes of Escherichia coli

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12 December 2020

The DNA Gyrase-Quinolone Complex

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12 December 2020

Functional differences between manganese and iron superoxide dismutases in Escherichia coli K-12

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12 December 2020

Role of iron and superoxide for generation of hydroxyl radical, oxidative DNA lesions, and mutagenesis in Escherichia coli

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12 December 2020

Fur-mediated transcriptional and post-transcriptional regulation of FeSOD expression in Escherichia coli

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12 December 2020

Proteins required for ultraviolet light and chemical mutagenesis. Identification of the products of the umuC locus of Escherichia coli

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12 December 2020

Protection of mammalian cells by o-phenanthroline from lethal and DNA-damaging effects produced by active oxygen species

1 reference

12 December 2020

Reversible induction of ATP synthesis by DNA damage and repair in Escherichia coli. In vivo NMR studies

1 reference

12 December 2020

Bacterial death by DNA gyrase poisoning

1 reference

12 December 2020

Iron ion-dependent modification of bases in DNA by the superoxide radical-generating system hypoxanthine/xanthine oxidase

1 reference

12 December 2020

Isolation of differentiated squamous and undifferentiated spindle carcinoma cell lines with differing metastatic potential from a 4-nitroquinoline N-Oxide-induced tongue carcinoma in a F344 rat.

1 reference

https://api.crossref.org/works/10.1038%2FMSB4100135

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Host defenses against Staphylococcus aureus infection require recognition of bacterial lipoproteins

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https://api.crossref.org/works/10.1038%2FMSB4100135

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Zn, Cu and Co in cyanobacteria: selective control of metal availability

1 reference

https://api.crossref.org/works/10.1038%2FMSB4100135

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DNA mismatch repair-induced double-strand breaks

1 reference

https://api.crossref.org/works/10.1038%2FMSB4100135

7 January 2021

Identifiers

DOI

10.1038/MSB4100135

1 reference

10 August 2017

1 reference

10 August 2017

1 reference