(Q35775488)

10 August 2017

title

Conformational changes in the archaerhodopsin-3 proton pump: detection of conserved strongly hydrogen bonded water networks (English)

1 reference

10 August 2017

Erica C Saint Clair

1

1 reference

10 August 2017

John I Ogren

2

1 reference

10 August 2017

Sergey Mamaev

3

1 reference

10 August 2017

Joel M Kralj

4

1 reference

10 August 2017

Kenneth J Rothschild

5

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10 August 2017

publication date

10 December 2011

1 reference

Journal of Biological Physics

10 August 2017

published in

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10 August 2017

volume

38

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10 August 2017

issue

1

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10 August 2017

page(s)

153-168

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Optical recording of action potentials in mammalian neurons using a microbial rhodopsin

10 August 2017

cites work

1 reference

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Proton transfer via a transient linear water-molecule chain in a membrane protein

12 July 2018

1 reference

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High-performance genetically targetable optical neural silencing by light-driven proton pumps

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3285725

Different structural changes occur in blue- and green-proteorhodopsins during the primary photoreaction.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3285725

Bacteriorhodopsin photocycle at cryogenic temperatures reveals distributed barriers of conformational substates

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3285725

Structures and spectral signatures of protonated water networks in bacteriorhodopsin

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3285725

Proton-coupled electron transfer drives the proton pump of cytochrome c oxidase

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3285725

Conformational changes in the photocycle of Anabaena sensory rhodopsin: absence of the Schiff base counterion protonation signal

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3285725

Proton binding within a membrane protein by a protonated water cluster

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3285725

X-ray diffraction of bacteriorhodopsin photocycle intermediates

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3285725

Architecture of the photosynthetic oxygen-evolving center

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3285725

Crystallographic structures of the M and N intermediates of bacteriorhodopsin: assembly of a hydrogen-bonded chain of water molecules between Asp-96 and the retinal Schiff base

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3285725

Mechanism of Proton Transport in Bacteriorhodopsin from Crystallographic Structures of the K, L, M1, M2, and M2′ Intermediates of the Photocycle

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3285725

Methionine changes in bacteriorhodopsin detected by FTIR and cell-free selenomethionine substitution

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3285725

Crystallographic structure of the retinal and the protein after deprotonation of the Schiff base: the switch in the bacteriorhodopsin photocycle

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3285725

Proton transfers in the photochemical reaction cycle of proteorhodopsin

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3285725

Role of internal water molecules in bacteriorhodopsin

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3285725

Structural changes in bacteriorhodopsin during ion transport at 2 angstrom resolution

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3285725

Structure of bacteriorhodopsin at 1.55 A resolution

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3285725

Localization and orientation of functional water molecules in bacteriorhodopsin as revealed by polarized Fourier transform infrared spectroscopy

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3285725

Intramembrane signaling mediated by hydrogen-bonding of water and carboxyl groups in bacteriorhodopsin and rhodopsin

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3285725

Glutamic Acid 204 is the Terminal Proton Release Group at the Extracellular Surface of Bacteriorhodopsin

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3285725

Fourier transform infrared difference spectroscopy of bacteriorhodopsin and its photoproducts

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3285725

Infrared evidence that the Schiff base of bacteriorhodopsin is protonated: bR570 and K intermediates

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3285725

Fourier transform infrared spectroscopic evidence for the existence of two conformations of the bacteriorhodopsin primary photoproduct at low temperature.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3285725

Protein dynamics in the bacteriorhodopsin photocycle: submillisecond Fourier transform infrared spectra of the L, M, and N photointermediates

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3285725

FTIR difference spectroscopy of bacteriorhodopsin: toward a molecular model

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3285725

Resonance Raman studies of the purple membrane

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3285725

Evolution of the archaeal rhodopsins: evolution rate changes by gene duplication and functional differentiation

12 July 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10867-011-9246-4

Role of arginine-82 in fast proton release during the bacteriorhodopsin photocycle: a time-resolved FT-IR study of purple membranes containing 15N-labeled arginine

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10867-011-9246-4

Detection of a water molecule in the active-site of bacteriorhodopsin: hydrogen bonding changes during the primary photoreaction.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10867-011-9246-4

Vibrational spectroscopy of water in narrow nanopores.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10867-011-9246-4

Crystal structures of archaerhodopsin-1 and -2: Common structural motif in archaeal light-driven proton pumps.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10867-011-9246-4

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10867-011-9246-4

Conformational changes detected in a sensory rhodopsin II-transducer complex

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10867-011-9246-4

Structural changes in the photoactive site of proteorhodopsin during the primary photoreaction.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10867-011-9246-4

Protonation state of Glu142 differs in the green- and blue-absorbing variants of proteorhodopsin.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10867-011-9246-4

FTIR study of the retinal Schiff base and internal water molecules of proteorhodopsin.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10867-011-9246-4

A Fourier transform infrared study of Neurospora rhodopsin: similarities with archaeal rhodopsins

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10867-011-9246-4

Internal water molecules of pharaonis phoborhodopsin studied by low-temperature infrared spectroscopy.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10867-011-9246-4

Structure and dynamics of OH-(aq).

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10867-011-9246-4

FTIR studies of internal water molecules in the Schiff base region of bacteriorhodopsin

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10867-011-9246-4

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10867-011-9246-4

Detection of threonine structural changes upon formation of the M-intermediate of bacteriorhodopsin: evidence for assignment to Thr-89

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10867-011-9246-4

Functional waters in intraprotein proton transfer monitored by FTIR difference spectroscopy

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10867-011-9246-4

Tryptophan perturbation in the L intermediate of bacteriorhodopsin: fourier transform infrared analysis with indole-15N shift

21 January 2018

1 reference

12 December 2020

Tyrosine and carboxyl protonation changes in the bacteriorhodopsin photocycle. 1. M412 and L550 intermediates

1 reference

12 December 2020

Relocation of internal bound water in bacteriorhodopsin during the photoreaction of M at low temperatures: an FTIR study

1 reference

12 December 2020

Vibrational spectroscopy of bacteriorhodopsin mutants: light-driven proton transport involves protonation changes of aspartic acid residues 85, 96, and 212

1 reference

12 December 2020

Primary photochemistry of bacteriorhodopsin: comparison of Fourier transform infrared difference spectra with resonance Raman spectra

1 reference

12 December 2020

The purple membrane of salt-loving bacteria

1 reference

12 December 2020

Water structural changes in the bacteriorhodopsin photocycle: analysis by Fourier transform infrared spectroscopy

1 reference

12 December 2020

Interaction of aspartate-85 with a water molecule and the protonated Schiff base in the L intermediate of bacteriorhodopsin: a Fourier-transform infrared spectroscopic study

1 reference

12 December 2020

Spectral Signatures of the Pentagonal Water Cluster in Bacteriorhodopsin

1 reference

12 December 2020

Tyrosine and carboxyl protonation changes in the bacteriorhodopsin photocycle. 2. Tyrosines-26 and -64

1 reference

12 December 2020

Vibrational spectroscopy of bacteriorhodopsin mutants. Evidence that ASP-96 deprotonates during the M----N transition

1 reference

12 December 2020

Vibrational spectroscopy of bacteriorhodopsin mutants: I. Tyrosine-185 protonates and deprotonates during the photocycle

1 reference

12 December 2020

Time-resolved Fourier transform infrared spectroscopy of the bacteriorhodopsin mutant Tyr-185-->Phe: Asp-96 reprotonates during O formation; Asp-85 and Asp-212 deprotonate during O decay

1 reference

12 December 2020

Investigation of the primary photochemistry of bacteriorhodopsin by low-temperature Fourier-transform infrared spectroscopy

1 reference

12 December 2020

10.1007/S10867-011-9246-4

Identifiers

DOI

1 reference

10 August 2017

1 reference

10 August 2017

1 reference