(Q35784814)

English

A structured viroid RNA serves as a substrate for dicer-like cleavage to produce biologically active small RNAs but is resistant to RNA-induced silencing complex-mediated degradation.

scientific article published on 3 January 2007

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23 December 2019

A structured viroid RNA serves as a substrate for dicer-like cleavage to produce biologically active small RNAs but is resistant to RNA-induced silencing complex-mediated degradation (English)

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23 December 2019

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23 December 2019

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Asuka Itaya

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23 December 2019

Xuehua Zhong

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23 December 2019

Yijun Qi

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23 December 2019

Ryuta Takeda

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23 December 2019

Ann R Harris

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23 December 2019

Carlos Molina

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23 December 2019

Richard S Nelson

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23 December 2019

Biao Ding

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3 January 2007

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23 December 2019

Journal of Virology

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23 December 2019

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23 December 2019

2980-2994

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23 December 2019

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23 December 2019

Viroid: a useful model for studying the basic principles of infection and RNA biology

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1865973

27 July 2018

Evidence for the existence of the loop E motif of Potato spindle tuber viroid in vivo

1 reference

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27 July 2018

Tertiary structural and functional analyses of a viroid RNA motif by isostericity matrix and mutagenesis reveal its essential role in replication

1 reference

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27 July 2018

Virus counterdefense: diverse strategies for evading the RNA-silencing immunity

1 reference

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27 July 2018

MicroRNAS and their regulatory roles in plants

1 reference

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27 July 2018

Gene regulation by microRNAs

1 reference

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27 July 2018

Silencing suppression by geminivirus proteins

1 reference

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27 July 2018

Interaction of viruses with the mammalian RNA interference pathway

1 reference

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27 July 2018

Non-cell autonomous RNA silencing

1 reference

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27 July 2018

Suppressors of RNA silencing encoded by plant viruses and their role in viral infections

1 reference

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27 July 2018

Antiviral silencing in animals

1 reference

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27 July 2018

MicroRNA biogenesis and function in plants

1 reference

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27 July 2018

A pathway for the biogenesis of trans-acting siRNAs in Arabidopsis

1 reference

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27 July 2018

DICER-LIKE 4 functions in trans-acting small interfering RNA biogenesis and vegetative phase change in Arabidopsis thaliana

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1865973

27 July 2018

Viroids and viroid-host interactions.

1 reference

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27 July 2018

Partially redundant functions of Arabidopsis DICER-like enzymes and a role for DCL4 in producing trans-acting siRNAs.

1 reference

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27 July 2018

Suppression of RNA interference by adenovirus virus-associated RNA.

1 reference

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27 July 2018

Correlation between structure and pathogenicity of potato spindle tuber viroid (PSTV).

1 reference

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27 July 2018

microRNA-directed phasing during trans-acting siRNA biogenesis in plants

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1865973

27 July 2018

Induction and suppression of RNA silencing: insights from viral infections

1 reference

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27 July 2018

RNAi-mediated pathways in the nucleus

1 reference

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27 July 2018

Dissecting RNA silencing in protoplasts uncovers novel effects of viral suppressors on the silencing pathway at the cellular level

1 reference

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27 July 2018

Adenovirus VA1 noncoding RNA can inhibit small interfering RNA and MicroRNA biogenesis

1 reference

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27 July 2018

RNA silencing in plants

1 reference

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27 July 2018

In vivo investigation of the transcription, processing, endonucleolytic activity, and functional relevance of the spatial distribution of a plant miRNA.

1 reference

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27 July 2018

MicroRNA regulation of gene expression in plants

1 reference

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27 July 2018

Viroids: petite RNA pathogens with distinguished talents

1 reference

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27 July 2018

Viroids: the minimal non-coding RNAs with autonomous replication

1 reference

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27 July 2018

Viral RNA silencing suppressors inhibit the microRNA pathway at an intermediate step

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1865973

27 July 2018

RNA silencing: a conserved antiviral immunity of plants and animals

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1865973

27 July 2018

On the role of RNA silencing in the pathogenicity and evolution of viroids and viral satellites

1 reference

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27 July 2018

The RITS complex-A direct link between small RNA and heterochromatin.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1865973

27 July 2018

The small RNA world

1 reference

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27 July 2018

Resistance of human hepatitis delta virus RNAs to dicer activity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1865973

27 July 2018

Role of microRNAs in plant and animal development

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1865973

27 July 2018

Small nucleolar RNA interference induced by antisense or double-stranded RNA in trypanosomatids

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1865973

27 July 2018

RNAi: an ever-growing puzzle

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1865973

27 July 2018

Retracted: An enhanced transient expression system in plants based on suppression of gene silencing by the p19 protein of tomato bushy stunt virus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1865973

27 July 2018

Identification of a minimal sequence required for activation of the tomato golden mosaic virus coat protein promoter in protoplasts

1 reference

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27 July 2018

The coat protein of turnip crinkle virus suppresses posttranscriptional gene silencing at an early initiation step

1 reference

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27 July 2018

Two chloroplastic viroids induce the accumulation of small RNAs associated with posttranscriptional gene silencing.

1 reference

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27 July 2018

A viral suppressor of RNA silencing differentially regulates the accumulation of short interfering RNAs and micro-RNAs in tobacco

1 reference

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27 July 2018

Two classes of short interfering RNA in RNA silencing

1 reference

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27 July 2018

A viral protein suppresses RNA silencing and binds silencing-generated, 21- to 25-nucleotide double-stranded RNAs

1 reference

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27 July 2018

RNAi: nature abhors a double-strand

1 reference

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27 July 2018

An abundant class of tiny RNAs with probable regulatory roles in Caenorhabditis elegans

1 reference

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27 July 2018

RNA silencing as a plant immune system against viruses

1 reference

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27 July 2018

Gene silencing as an adaptive defence against viruses

1 reference

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27 July 2018

RNA silencing in plants--defense and counterdefense

1 reference

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27 July 2018

Replicating potato spindle tuber viroid RNA is accompanied by short RNA fragments that are characteristic of post-transcriptional gene silencing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1865973

27 July 2018

Viral suppressors of RNA silencing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1865973

27 July 2018

HC-Pro suppression of transgene silencing eliminates the small RNAs but not transgene methylation or the mobile signal

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1865973

27 July 2018

RNA interference is mediated by 21- and 22-nucleotide RNAs

1 reference

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27 July 2018

Cellular basis of potato spindle tuber viroid systemic movement

1 reference

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27 July 2018

Virus-encoded suppressor of posttranscriptional gene silencing targets a maintenance step in the silencing pathway

1 reference

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27 July 2018

Avsunviroidae family: viroids containing hammerhead ribozymes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1865973

27 July 2018

Heavy de novo methylation at symmetrical and non-symmetrical sites is a hallmark of RNA-directed DNA methylation

1 reference

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27 July 2018

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

1 reference

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27 July 2018

Viroid processing: switch from cleavage to ligation is driven by a change from a tetraloop to a loop E conformation

1 reference

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27 July 2018

An infectious viroid RNA replicon evolved from an in vitro-generated non-infectious viroid deletion mutant via a complementary deletion in vivo

1 reference

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27 July 2018

Jellyfish green fluorescent protein as a reporter for virus infections

1 reference

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27 July 2018

Domains in viroids: evidence of intermolecular RNA rearrangements and their contribution to viroid evolution

1 reference

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27 July 2018

Imaging of viroids in nuclei from tomato leaf tissue by in situ hybridization and confocal laser scanning microscopy.

1 reference

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27 July 2018

Nuclear transport of plant potyviral proteins

1 reference

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27 July 2018

Nucleotide sequence and secondary structure of potato spindle tuber viroid

1 reference

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27 July 2018

Optimization of Agrobacterium-mediated transient assays of gene expression in lettuce, tomato and Arabidopsis.

1 reference

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25 September 2018

Hierarchical action and inhibition of plant Dicer-like proteins in antiviral defense.

1 reference

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25 September 2018

Biochemical specialization within Arabidopsis RNA silencing pathways

1 reference

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25 September 2018

The complex interplay between plant viruses and host RNA-silencing pathways.

1 reference

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25 September 2018

Plant virus-derived small interfering RNAs originate predominantly from highly structured single-stranded viral RNAs.

1 reference

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25 September 2018

Identification of a peach latent mosaic viroid hairpin able to act as a Dicer-like substrate

1 reference

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25 September 2018

RNA silencing: no mercy for viruses?

1 reference

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25 September 2018

Effects and side-effects of viral RNA silencing suppressors on short RNAs

1 reference

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25 September 2018

Probing the microRNA and small interfering RNA pathways with virus-encoded suppressors of RNA silencing.

1 reference

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25 September 2018

Plant viral suppressors of RNA silencing

1 reference

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25 September 2018

Viroid-induced RNA silencing of GFP-viroid fusion transgenes does not induce extensive spreading of methylation or transitive silencing.

1 reference

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25 September 2018

RNA silencing genes control de novo DNA methylation

1 reference

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25 September 2018

The nuclear dsRNA binding protein HYL1 is required for microRNA accumulation and plant development, but not posttranscriptional transgene silencing

1 reference

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25 September 2018

Short interfering RNAs specific for potato spindle tuber viroid are found in the cytoplasm but not in the nucleus

1 reference

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25 September 2018

RNA silencing as related to viroid induced symptom expression

1 reference

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25 September 2018

MicroRNAs: genomics, biogenesis, mechanism, and function

1 reference

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25 September 2018

Adenosine Kinase Is Inactivated by Geminivirus AL2 and L2 Proteins

1 reference

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25 September 2018

Differential subnuclear localization of RNA strands of opposite polarity derived from an autonomously replicating viroid

1 reference

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25 September 2018

Inhibition of cell growth and shoot development by a specific nucleotide sequence in a noncoding viroid RNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1865973

25 September 2018

Short defective interfering RNAs of tombusviruses are not targeted but trigger post-transcriptional gene silencing against their helper virus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1865973

25 September 2018

Potato spindle tuber viroid as inducer of RNA silencing in infected tomato

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1865973

25 September 2018

Silencing on the spot. Induction and suppression of RNA silencing in the Agrobacterium-mediated transient expression system

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1865973

25 September 2018

Activation and suppression of RNA silencing by plant viruses

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1865973

25 September 2018

RNA as a target of double-stranded RNA-mediated genetic interference in Caenorhabditis elegans

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1865973

25 September 2018

Systemic spread of sequence-specific transgene RNA degradation in plants is initiated by localized introduction of ectopic promoterless DNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1865973

25 September 2018

Initiation and maintenance of virus-induced gene silencing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1865973

25 September 2018

RNA-directed de novo methylation of genomic sequences in plants.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1865973

25 September 2018

A Replication Cycle for Viroids and Other Small Infectious RNA's

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1865973

25 September 2018

Interdependence of pathogenicity and replicability with potato spindle tuber viroid

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1865973

25 September 2018

Systemic signalling in gene silencing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1865973

15 November 2018

Replication of Potato spindle tuber viroid in cultured cells of tobacco and Nicotiana benthamiana: the role of specific nucleotides in determining replication levels for host adaptation

1 reference

https://pubmed.ncbi.nlm.nih.gov/17202210

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Destabilization of potato spindle tuber viroid by mutations in the left terminal loop

1 reference

https://pubmed.ncbi.nlm.nih.gov/17202210

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Movement of potato spindle tuber viroid reveals regulatory points of phloem-mediated RNA traffic

1 reference

https://pubmed.ncbi.nlm.nih.gov/17202210

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

MicroRNAs: at the root of plant development?

1 reference

https://pubmed.ncbi.nlm.nih.gov/17202210

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1128/JVI.02339-06

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17202210%20AND%20SRC:MED&resulttype=core&format=json

23 December 2019

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17202210%20AND%20SRC:MED&resulttype=core&format=json

23 December 2019

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17202210%20AND%20SRC:MED&resulttype=core&format=json

23 December 2019

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