(Q35785915)

10 August 2017

The neoselectionist theory of genome evolution (English)

1 reference

10 August 2017

Giorgio Bernardi

1

1 reference

PubMed ID

17494746

10 August 2017

language of work or name

English

0 references

publication date

9 May 2007

1 reference

10 August 2017

6

1 reference

Proceedings of the National Academy of Sciences of the United States of America

inferred from page(s)

published in

1 reference

10 August 2017

104

1 reference

10 August 2017

20

1 reference

10 August 2017

8385-8390

1 reference

EVOLUTION IN MENDELIAN POPULATIONS

10 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1866311

Combinatorial epigenetics, "junk DNA", and the evolution of complex organisms

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1866311

Human chromosomal bands: nested structure, high-definition map and molecular basis

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1866311

DNA methylation and body temperature in fishes

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1866311

DNA methylation in reptiles

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1866311

Spreading of silent chromatin: inaction at a distance

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1866311

A new perspective on isochore evolution.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1866311

Insulators: exploiting transcriptional and epigenetic mechanisms

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1866311

An isochore map of human chromosomes

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1866311

A Factor (or Mutator Gene) Influencing Mutation Rates in Escherichia Coli

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1866311

The platypus is in its place: nuclear genes and indels confirm the sister group relation of monotremes and Therians

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1866311

Compositional gene landscapes in vertebrates.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1866311

Inaccurate reconstruction of ancestral GC levels creates a "vanishing isochores" effect

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1866311

12 July 2018

Our load of mutations

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1866311

pANT: a method for the pairwise assessment of nonfunctionalization times of processed pseudogenes.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1866311

Comparative complete genome sequence analysis of the amino acid replacements responsible for the thermostability of Corynebacterium efficiens

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1866311

The modern molecular clock

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1866311

Controlling the double helix

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1866311

Near-neutrality in evolution of genes and gene regulation

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1866311

Misunderstandings about isochores. Part 1

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1866311

The evolution of isochores

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1866311

Initial sequencing and analysis of the human genome

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1866311

The compositional evolution of vertebrate genomes

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1866311

Isochores and the evolutionary genomics of vertebrates

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1866311

Correlations of nucleotide substitution rates and base composition of mammalian coding sequences with protein structure.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1866311

Evidence of selection on silent site base composition in mammals: potential implications for the evolution of isochores and junk DNA.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1866311

Spatial and temporal dynamics of DNA replication sites in mammalian cells

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1866311

The human genome: organization and evolutionary history

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1866311

The vertebrate genome: isochores and evolution

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1866311

12 July 2018

Non-Darwinian Evolution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1866311

Evolutionary Rate at the Molecular Level

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1866311

Altered base ratios in the DNA of an Escherichia coli mutator strain

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1866311

An analysis of the bovine genome by Cs2SO4-Ag density gradient centrifugation

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1866311

Slightly Deleterious Mutant Substitutions in Evolution

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1866311

The mosaic genome of warm-blooded vertebrates

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1866311

Evidence for higher rates of nucleotide substitution in rodents than in man

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1866311

Compositional patterns in vertebrate genomes: conservation and change in evolution

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1866311

Compositional constraints and genome evolution

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1866311

The William Allan memorial award address: the background for the development of the chromosome banding techniques.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1866311

Compositional transitions in the nuclear genomes of cold-blooded vertebrates

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1866311

Compositional patterns in the nuclear genome of cold-blooded vertebrates

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1866311

The distribution of genes in the human genome

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1866311

CpG islands, genes and isochores in the genomes of vertebrates

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1866311

A universal compositional correlation among codon positions

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1866311

Higher rates of amino acid substitution in rodents than in humans

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1866311

An approach to the organization of eukaryotic genomes at a macromolecular level

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1866311

An analysis of eukaryotic genomes by density gradient centrifugation

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1866311

The appearance of new structures and functions in proteins during evolution.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1866311

Thermal stability and protein structure

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1866311

The Nearly Neutral Theory of Molecular Evolution

12 July 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0701652104

Isolation and characterization of mouse and guinea pig satellite deoxyribonucleic acids

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0701652104

Chromosome-wide assessment of replication timing for human chromosomes 11q and 21q: disease-related genes in timing-switch regions

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0701652104

Simple proteomic checks for detecting noncoding RNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0701652104

Compositional patterns in reptilian genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0701652104

Synonymous codon bias is not caused by mutation bias in G+C-rich genes in humans.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0701652104

Isochores, GC3 and mutation biases in the human genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0701652104

Distinct changes of genomic biases in nucleotide substitution at the time of Mammalian radiation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0701652104

Substantial regional variation in substitution rates in the human genome: importance of GC content, gene density, and telomere-specific effects.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0701652104

Organization and base composition of tilapia Hox genes: implications for the evolution of Hox clusters in fish.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0701652104

18S ribosomal RNA and tetrapod phylogeny.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0701652104

Thermal adaptation of the small subunit ribosomal RNA gene: a comparative study

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0701652104

Evolutionary process of amino acid biosynthesis in Corynebacterium at the whole genome level

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0701652104

GC3 heterogeneity and body temperature in vertebrates

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0701652104

The distribution of genes in the Drosophila genome.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0701652104

Comparative genomics of Anopheles gambiae and Drosophila melanogaster

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0701652104

Are GC-rich isochores vanishing in mammals?

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0701652104

Population size and rate of evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0701652104

A Novel Method Distinguishes Between Mutation Rates and Fixation Biases in Patterns of Single-Nucleotide Substitution

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0701652104

Localization of the gene-richest and the gene-poorest isochores in the interphase nuclei of mammals and birds

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0701652104

Methylation patterns in the isochores of vertebrate genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0701652104

So much "junk" DNA in our genome

21 January 2018

1 reference

12 December 2020

Correlations between genomic GC levels and optimal growth temperatures in prokaryotes

1 reference

12 December 2020

The base composition of the genes is correlated with the secondary structures of the encoded proteins

1 reference

12 December 2020

Body temperature and evolutionary genomics of vertebrates: a lesson from the genomes of Takifugu rubripes and Tetraodon nigroviridis

1 reference

12 December 2020

The correlation of protein hydropathy with the base composition of coding sequences

1 reference

12 December 2020

Mammalian GC content is very close to mutational equilibrium

1 reference

12 December 2020

The compositional transition between the genomes of cold- and warm-blooded vertebrates: codon frequencies in orthologous genes

1 reference

12 December 2020

Patterns of nucleotide substitution in pseudogenes and functional genes

1 reference

12 December 2020

CpG islands: features and distribution in the genomes of vertebrates

1 reference

12 December 2020

The gene distribution of the human genome

1 reference

12 December 2020

Evolutionary changes in CpG and methylation levels in the genome of vertebrates

1 reference

12 December 2020

Correlations between the compositional properties of human genes, codon usage, and amino acid composition of proteins

1 reference

12 December 2020

Polite DNA: functional density and functional compatibility in genomes

1 reference

12 December 2020

The base substitution fidelity of eucaryotic DNA polymerases. Mispairing frequencies, site preferences, insertion preferences, and base substitution by dislocation

1 reference

12 December 2020

Identifiers

DOI

10.1073/PNAS.0701652104

1 reference

10 August 2017

0 references

1 reference

10 August 2017

1 reference

PubMed ID

17494746