(Q35799174)

English

Immature oxidative stress management as a unifying principle in the pathogenesis of necrotizing enterocolitis: insights from an agent-based model.

scientific article published on 4 January 2012

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scholarly article

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19 January 2020

Immature oxidative stress management as a unifying principle in the pathogenesis of necrotizing enterocolitis: insights from an agent-based model (English)

1 reference

Europe PubMed Central

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19 January 2020

agent-based model

1 reference

based on heuristic

inferred from title

necrotizing enterocolitis

1 reference

based on heuristic

inferred from title

5

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19 January 2020

author name string

Moses Kim

1

1 reference

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19 January 2020

Scott Christley

2

1 reference

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19 January 2020

John C Alverdy

3

1 reference

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19 January 2020

Donald Liu

4

1 reference

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19 January 2020

publication date

4 January 2012

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19 January 2020

Surgical Infections

1 reference

Europe PubMed Central

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19 January 2020

13

1 reference

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19 January 2020

1

1 reference

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19 January 2020

18-32

1 reference

Europe PubMed Central

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19 January 2020

Agent-based models in translational systems biology.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3292758

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Bifidobacterium bifidum improves intestinal integrity in a rat model of necrotizing enterocolitis

1 reference

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Agent-based modeling of endotoxin-induced acute inflammatory response in human blood leukocytes

1 reference

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Agent-based modeling of host-pathogen systems: The successes and challenges

1 reference

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A computational approach to resolve cell level contributions to early glandular epithelial cancer progression

1 reference

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27 July 2018

Microecology, intestinal epithelial barrier and necrotizing enterocolitis

1 reference

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27 July 2018

At the biological modeling and simulation frontier.

1 reference

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27 July 2018

16S rRNA gene-based analysis of fecal microbiota from preterm infants with and without necrotizing enterocolitis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3292758

27 July 2018

The development of animal models for the study of necrotizing enterocolitis

1 reference

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27 July 2018

A model of TLR4 signaling and tolerance using a qualitative, particle-event-based method: introduction of spatially configured stochastic reaction chambers (SCSRC).

1 reference

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27 July 2018

Detailed qualitative dynamic knowledge representation using a BioNetGen model of TLR-4 signaling and preconditioning

1 reference

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27 July 2018

Multiscale agent-based cancer modeling

1 reference

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27 July 2018

A patient-specific in silico model of inflammation and healing tested in acute vocal fold injury

1 reference

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27 July 2018

TLR-4, IL-1R and TNF-R signaling to NF-kappaB: variations on a common theme

1 reference

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27 July 2018

Introduction of an agent-based multi-scale modular architecture for dynamic knowledge representation of acute inflammation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3292758

27 July 2018

Translational systems biology of inflammation

1 reference

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27 July 2018

Translational systems biology: introduction of an engineering approach to the pathophysiology of the burn patient

1 reference

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27 July 2018

Challenges and rewards on the road to translational systems biology in acute illness: four case reports from interdisciplinary teams

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3292758

27 July 2018

Multi-cell agent-based simulation of the microvasculature to study the dynamics of circulating inflammatory cell trafficking.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3292758

27 July 2018

Pattern-oriented modeling of agent-based complex systems: lessons from ecology

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3292758

27 July 2018

Transition to quorum sensing in an Agrobacterium population: A stochastic model

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3292758

27 July 2018

The role of PAF, TLR, and the inflammatory response in neonatal necrotizing enterocolitis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3292758

27 July 2018

Crucial role of p53-dependent cellular senescence in suppression of Pten-deficient tumorigenesis

1 reference

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27 July 2018

Disordered enterocyte signaling and intestinal barrier dysfunction in the pathogenesis of necrotizing enterocolitis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3292758

27 July 2018

Agent-based computational modeling of wounded epithelial cell monolayers.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3292758

27 July 2018

Mathematical models of the acute inflammatory response.

1 reference

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27 July 2018

Short chain fatty acid regulation of signaling genes expressed by the intestinal epithelium.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3292758

27 July 2018

The tight junction: a multifunctional complex

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3292758

27 July 2018

Donor human milk versus formula for preventing necrotising enterocolitis in preterm infants: systematic review

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3292758

27 July 2018

Neonatal necrotizing enterocolitis: clinical considerations and pathogenetic concepts

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3292758

27 July 2018

Role of mucins in inflammatory bowel disease: important lessons from experimental models

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3292758

27 July 2018

Oxidants, oxidative stress and the biology of ageing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3292758

27 July 2018

p53 induces apoptosis by caspase activation through mitochondrial cytochrome c release.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3292758

27 July 2018

Mathematical model of a virus-neutralizing immunglobulin response.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3292758

27 July 2018

A model for p53-induced apoptosis

1 reference

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27 July 2018

Reactive oxygen species are downstream mediators of p53-dependent apoptosis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3292758

27 July 2018

Suppression of TNF-alpha-induced apoptosis by NF-kappaB

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3292758

27 July 2018

TNF- and cancer therapy-induced apoptosis: potentiation by inhibition of NF-kappaB

1 reference

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27 July 2018

Tumor necrosis factor and interleukin-1 lead to phosphorylation and loss of I kappa B alpha: a mechanism for NF-kappa B activation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3292758

27 July 2018

Structure, regulation and function of NF-kappa B

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3292758

27 July 2018

Transcriptional activation of the human TNF-alpha promoter by superantigen in human monocytic cells: role of NF-kappa B.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3292758

27 July 2018

Role of NF-kappa B in the regulation of inducible nitric oxide synthase in an MTAL cell line

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3292758

27 July 2018

Contribution of oxygen-derived free radicals to experimental necrotizing enterocolitis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3292758

27 July 2018

Pathology of neonatal necrotizing enterocolitis: a ten-year experience

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3292758

27 July 2018

Reactive oxygen intermediates as apparently widely used messengers in the activation of the NF-kappa B transcription factor and HIV-1

1 reference

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27 July 2018

Using a mathematical model to analyze the role of probiotics and inflammation in necrotizing enterocolitis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3292758

25 September 2018

Redefining the role of intestinal microbes in the pathogenesis of necrotizing enterocolitis

1 reference

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Simulating Brain Tumor Heterogeneity with a Multiscale Agent-Based Model: Linking Molecular Signatures, Phenotypes and Expansion Rate

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25 September 2018

Short-chain fatty acids and polyamines in the pathogenesis of necrotizing enterocolitis: Kinetics aspects in gnotobiotic quails

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A critical role for TLR4 in the pathogenesis of necrotizing enterocolitis by modulating intestinal injury and repair.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3292758

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Low species diversity and high interindividual variability in faeces of preterm infants as revealed by sequences of 16S rRNA genes and PCR-temporal temperature gradient gel electrophoresis profiles

1 reference

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Intestinal barrier failure during experimental necrotizing enterocolitis: protective effect of EGF treatment.

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Probing the effects of the well-mixed assumption on viral infection dynamics.

1 reference

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Concepts for developing a collaborative in silico model of the acute inflammatory response using agent-based modeling.

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1 reference

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25 September 2018

Too much short chain fatty acids cause neonatal necrotizing enterocolitis

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Spatiotemporal dynamics of HIV propagation.

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25 September 2018

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15 November 2018

The composition of a mucus glycoprotein from meconium of cystic fibrosis, healthy pre-term and full-term neonates

1 reference

https://pubmed.ncbi.nlm.nih.gov/22217195

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Necrotizing enterocolitis

1 reference

https://pubmed.ncbi.nlm.nih.gov/22217195

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Systems biology and inflammation

1 reference

https://pubmed.ncbi.nlm.nih.gov/22217195

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Proinflammatory cytokines cause NO*-dependent and -independent changes in expression and localization of tight junction proteins in intestinal epithelial cells

1 reference

https://pubmed.ncbi.nlm.nih.gov/22217195

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Expression of inducible nitric oxide synthase and interleukin-12 in experimental necrotizing enterocolitis

1 reference

https://pubmed.ncbi.nlm.nih.gov/22217195

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1089/SUR.2011.057

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22217195%20AND%20SRC:MED&resulttype=core&format=json

19 January 2020

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22217195%20AND%20SRC:MED&resulttype=core&format=json

19 January 2020

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22217195%20AND%20SRC:MED&resulttype=core&format=json

19 January 2020

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