(Q35843741)

English

Genes encoding pentatricopeptide repeat (PPR) proteins are not conserved in location in plant genomes and may be subject to diversifying selection

scientific article published on 23 May 2007

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scholarly article

1 reference

Europe PubMed Central

10 August 2017

2 references

19 September 2019

20 December 2019

Genes encoding pentatricopeptide repeat (PPR) proteins are not conserved in location in plant genomes and may be subject to diversifying selection (English)

1 reference

Europe PubMed Central

10 August 2017

biomedical investigative technique

1 reference

19 September 2019

1 reference

20 December 2019

author name string

Rachel Geddy

1

1 reference

Europe PubMed Central

10 August 2017

Gregory G Brown

2

1 reference

Europe PubMed Central

10 August 2017

language of work or name

0 references

publication date

23 May 2007

3 references

Europe PubMed Central

10 August 2017

19 September 2019

20 December 2019

3 references

Europe PubMed Central

10 August 2017

19 September 2019

20 December 2019

8

1 reference

Europe PubMed Central

10 August 2017

130

1 reference

Europe PubMed Central

10 August 2017

copyright license

Creative Commons Attribution 2.0 Generic

2 references

Europe PubMed Central

19 September 2019

Europe PubMed Central

20 December 2019

copyright status

0 references

https://scigraph.springernature.com/pub.10.1186/1471-2164-8-130

0 references

TPRpred: a tool for prediction of TPR-, PPR- and SEL1-like repeats from protein sequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1892557

27 July 2018

Towards positional cloning in Brassica napus: generation and analysis of doubled haploid B. rapa possessing the B. napus pol CMS and Rfp nuclear restorer gene

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1892557

27 July 2018

RNA immunoprecipitation and microarray analysis show a chloroplast Pentatricopeptide repeat protein to be associated with the 5' region of mRNAs whose translation it activates

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1892557

27 July 2018

Segmental structure of the Brassica napus genome based on comparative analysis with Arabidopsis thaliana

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1892557

27 July 2018

Evolving disease resistance genes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1892557

27 July 2018

Arabidopsis emb175 and other ppr knockout mutants reveal essential roles for pentatricopeptide repeat (PPR) proteins in plant embryogenesis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1892557

27 July 2018

Unveiling the molecular arms race between two conflicting genomes in cytoplasmic male sterility?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1892557

27 July 2018

Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins reveals their essential role in organelle biogenesis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1892557

27 July 2018

CD-Search: protein domain annotations on the fly

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1892557

27 July 2018

Tandem and segmental gene duplication and recombination in the evolution of plant disease resistance gene

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1892557

27 July 2018

Positional cloning of the rice Rf-1 gene, a restorer of BT-type cytoplasmic male sterility that encodes a mitochondria-targeting PPR protein

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1892557

27 July 2018

Gene prediction with a hidden Markov model and a new intron submodel

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1892557

27 July 2018

Genome-Level Evolution of Resistance Genes in Arabidopsis thaliana

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1892557

27 July 2018

A pentatricopeptide repeat-containing gene that promotes the processing of aberrant atp6 RNA of cytoplasmic male-sterile rice.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1892557

27 July 2018

Comparison of a Brassica oleracea Genetic Map With the Genome of Arabidopsis thaliana

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1892557

27 July 2018

Identification of the fertility restoration locus, Rfo, in radish, as a member of the pentatricopeptide‐repeat protein family

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1892557

27 July 2018

Structural divergence of chromosomal segments that arose from successive duplication events in the Arabidopsis genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1892557

27 July 2018

A pentatricopeptide repeat-containing gene restores fertility to cytoplasmic male-sterile plants.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1892557

27 July 2018

The generation of plant disease resistance gene specificities.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1892557

27 July 2018

The PPR motif - a TPR-related motif prevalent in plant organellar proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1892557

27 July 2018

The structure of the tetratricopeptide repeats of protein phosphatase 5: implications for TPR-mediated protein-protein interactions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1892557

27 July 2018

Rapid reorganization of resistance gene homologues in cereal genomes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1892557

27 July 2018

Evolution by the birth-and-death process in multigene families of the vertebrate immune system

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1892557

27 July 2018

Computational method to predict mitochondrially imported proteins and their targeting sequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1892557

27 July 2018

Cytoplasmic inheritance and intragenomic conflict

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1892557

27 July 2018

A pentatricopeptide repeat protein is essential for RNA editing in chloroplasts

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1892557

24 September 2018

Predotar: A tool for rapidly screening proteomes for N-terminal targeting sequences.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1892557

24 September 2018

The roles of segmental and tandem gene duplication in the evolution of large gene families in Arabidopsis thaliana

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1892557

24 September 2018

Map-based cloning of a fertility restorer gene, Rf-1, in rice (Oryza sativa L.).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1892557

24 September 2018

The radish Rfo restorer gene of Ogura cytoplasmic male sterility encodes a protein with multiple pentatricopeptide repeats.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1892557

24 September 2018

Genome-wide analysis of NBS-LRR-encoding genes in Arabidopsis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1892557

24 September 2018

Comparative physical mapping of segments of the genome of Brassica oleracea var. alboglabra that are homoeologous to sequenced regions of chromosomes 4 and 5 of Arabidopsis thaliana

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1892557

24 September 2018

Extensive duplication and reshuffling in the Arabidopsis genome.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1892557

24 September 2018

The evolution of disease resistance genes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1892557

24 September 2018

Clusters of resistance genes in plants evolve by divergent selection and a birth-and-death process

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1892557

24 September 2018

Novel disease resistance specificities result from sequence exchange between tandemly repeated genes at the Cf-4/9 locus of tomato.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1892557

24 September 2018

Formation of the Arabidopsis pentatricopeptide repeat family

1 reference

https://pubmed.ncbi.nlm.nih.gov/17521445

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Mode of amplification and reorganization of resistance genes during recent Arabidopsis thaliana evolution

1 reference

https://pubmed.ncbi.nlm.nih.gov/17521445

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Chloroplast RNA-binding and pentatricopeptide repeat proteins

1 reference

https://pubmed.ncbi.nlm.nih.gov/17521445

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1186/1471-2164-8-130

1 reference

Europe PubMed Central

10 August 2017

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0 references

1 reference

Europe PubMed Central

10 August 2017

1 reference

Europe PubMed Central

10 August 2017

ResearchGate publication ID

0 references

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