(Q35850236)

10 August 2017

Integrated network analysis identifies nitric oxide response networks and dihydroxyacid dehydratase as a crucial target in Escherichia coli (English)

1 reference

10 August 2017

1 reference

Daniel R Hyduke

1

1 reference

10 August 2017

Laura R Jarboe

2

1 reference

10 August 2017

Linh M Tran

3

1 reference

10 August 2017

Katherine J Y Chou

4

1 reference

10 August 2017

James C Liao

5

1 reference

10 August 2017

language of work or name

English

0 references

publication date

9 May 2007

1 reference

Proceedings of the National Academy of Sciences of the United States of America

10 August 2017

1 reference

10 August 2017

104

1 reference

10 August 2017

8484-8489

1 reference

10 August 2017

20

1 reference

Nitric oxide in chemostat-cultured Escherichia coli is sensed by Fnr and other global regulators: unaltered methionine biosynthesis indicates lack of S nitrosation

10 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1895976

Global gene expression profiling of the asymptomatic bacteriuria Escherichia coli strain 83972 in the human urinary tract

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1895976

IscR-dependent gene expression links iron-sulphur cluster assembly to the control of O2-regulated genes in Escherichia coli.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1895976

BioWarehouse: a bioinformatics database warehouse toolkit

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1895976

The yjeB (nsrR) gene of Escherichia coli encodes a nitric oxide-sensitive transcriptional regulator

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1895976

Nitric oxide and nitrosative stress tolerance in bacteria

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1895976

EcoCyc: a comprehensive database resource for Escherichia coli

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1895976

Antimicrobial reactive oxygen and nitrogen species: concepts and controversies

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1895976

Prominent roles of the NorR and Fur regulators in the Escherichia coli transcriptional response to reactive nitrogen species

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1895976

RegulonDB (version 4.0): transcriptional regulation, operon organization and growth conditions in Escherichia coli K-12

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1895976

Network component analysis: reconstruction of regulatory signals in biological systems

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1895976

A Software Package for cDNA Microarray Data Normalization and Assessing Confidence Intervals

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1895976

NO sensing by FNR: regulation of the Escherichia coli NO-detoxifying flavohaemoglobin, Hmp.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1895976

Flavorubredoxin, an inducible catalyst for nitric oxide reduction and detoxification in Escherichia coli

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1895976

One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1895976

Direct nitric oxide signal transduction via nitrosylation of iron-sulfur centers in the SoxR transcription activator

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1895976

(S)NO signals: translocation, regulation, and a consensus motif

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1895976

Nitric oxide and macrophage function

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1895976

"NONOates" (1-substituted diazen-1-ium-1,2-diolates) as nitric oxide donors: convenient nitric oxide dosage forms

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1895976

Improved synthesis of the sodium salt of DL-alpha, beta-dihydroxyisovaleric acid.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1895976

Murine cytotoxic activated macrophages inhibit aconitase in tumor cells. Inhibition involves the iron-sulfur prosthetic group and is reversible

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1895976

Nitric oxide: a cytotoxic activated macrophage effector molecule

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1895976

alpha, beta-Dihydroxyisovalerate dehydratase. A superoxide-sensitive enzyme.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1895976

EPR demonstration of iron-nitrosyl complex formation by cytotoxic activated macrophages

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1895976

Oxygen and toxicity inhibition of amino acid biosynthesis

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1895976

Nitric oxide and peroxynitrite promote complete disruption of the [4Fe-4S] cluster of recombinant human iron regulatory protein 1.

11 July 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0610888104

Interaction of the bacterial terminal oxidase cytochrome bd with nitric oxide.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0610888104

Respiratory detoxification of nitric oxide by the cytochrome c nitrite reductase of Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0610888104

Transcriptional responses of Escherichia coli to S-nitrosoglutathione under defined chemostat conditions reveal major changes in methionine biosynthesis

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0610888104

New genes implicated in the protection of anaerobically grown Escherichia coli against nitric oxide.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0610888104

gNCA: a framework for determining transcription factor activity based on transcriptome: identifiability and numerical implementation

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0610888104

Determination of functional interactions among signalling pathways in Escherichia coli K-12.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0610888104

Repair of nitric oxide-modified ferredoxin [2Fe-2S] cluster by cysteine desulfurase (IscS).

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0610888104

Quinones as the redox signal for the arc two-component system of bacteria

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0610888104

Escherichia coli YtfE is a di-iron protein with an important function in assembly of iron-sulphur clusters.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0610888104

Repair of oxidized iron-sulfur clusters in Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0610888104

The inactivation of Fe-S cluster containing hydro-lyases by superoxide.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1895976

Cytochrome bo3 from Escherichia coli: the binding and turnover of nitric oxide

24 September 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0610888104

A non-haem iron centre in the transcription factor NorR senses nitric oxide

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0610888104

Flavohemoglobin Hmp affords inducible protection for Escherichia coli respiration, catalyzed by cytochromes bo' or bd, from nitric oxide

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17494765

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

A rapid determination of dihydroxyacid dehydratase activity in microbial cell suspensions

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17494765

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1073/PNAS.0610888104

1 reference

10 August 2017

0 references

1 reference

10 August 2017

1 reference