(Q35925778)

11 August 2017

An assessment of neural network and statistical approaches for prediction of E. coli promoter sites (English)

1 reference

11 August 2017

0 references

0 references

Horton PB

1

1 reference

11 August 2017

Kanehisa M

series ordinal

2

1 reference

11 August 2017

language of work or name

English

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publication date

1 August 1992

1 reference

11 August 2017

Nucleic Acids Research

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11 August 2017

20

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11 August 2017

16

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11 August 2017

4331-4338

1 reference

Escherichia colipromoter sequences predictin vitroRNA polymerase selectivity

11 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=334144

Computer methods to locate signals in nucleic acid sequences

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=334144

Search algorithm for pattern match analysis of nuleic add sequences

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=334144

Compilation and analysis ofEscherichia colipromoter DNA sequences

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=334144

Promoters recognized by Escherichia coli RNA polymerase selected by function: highly efficient promoters from bacteriophage T5.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=334144

Analysis of E. coli promoter sequences

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=334144

Predicting the secondary structure of globular proteins using neural network models

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=334144

Protein secondary structure prediction with a neural network

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=334144

Influence of the sequence-dependent flexure of DNA on transcription in E. coli

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=334144

In vivo gene expression directed by synthetic promoter constructions restricted to the -10 and -35 consensus hexamers of E. coli.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=334144

Improvements in protein secondary structure prediction by an enhanced neural network

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=334144

Application of a new method of pattern recognition in DNA sequence analysis: a study of E. coli promoters

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=334144

Transcription in vivo directed by consensus sequences of E.coli promoters: their context heavily affects efficiencies and start sites

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=334144

Neural network optimization for E. coli promoter prediction

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=334144

Training back-propagation neural networks to define and detect DNA-binding sites

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=334144

Prediction of ATP/GTP-binding motif: a comparison of a perceptron type neural network and a consensus sequence method [corrected]

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=334144

DNA sequences of random origin as probes of Escherichia coli promoter architecture.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=334144

Discriminant analysis of promoter regions in Escherichia coli sequences.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=334144

Neural network models for promoter recognition.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=334144

Consensus methods for finding and ranking DNA binding sites. Application to Escherichia coli promoters

11 July 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/1508724

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

In vivo promoter activity of the synthetic Pribnow box

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/1508724

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Escherichia coli promoters. I. Consensus as it relates to spacing class, specificity, repeat substructure, and three-dimensional organization

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/1508724

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/20.16.4331

1 reference

11 August 2017

1 reference

11 August 2017

PubMed publication ID

1508724

1 reference