(Q35928339)

11 August 2017

Kinking of DNA and RNA helices by bulged nucleotides observed by fluorescence resonance energy transfer (English)

1 reference

11 August 2017

Gohlke C

1

1 reference

11 August 2017

Murchie AI

series ordinal

2

1 reference

11 August 2017

Lilley DM

series ordinal

3

1 reference

11 August 2017

Clegg RM

series ordinal

4

1 reference

11 August 2017

language of work or name

English

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publication date

1 November 1994

1 reference

Proceedings of the National Academy of Sciences of the United States of America

11 August 2017

1 reference

11 August 2017

91

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11 August 2017

24

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11 August 2017

11660-11664

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Observing the helical geometry of double-stranded DNA in solution by fluorescence resonance energy transfer

11 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=45291

Structure of the B-DNA decamer C-C-A-A-C-I-T-T-G-G in two different space groups: conformational flexibility of B-DNA

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=45291

Structures of bulged three-way DNA junctions

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=45291

The solution structure of the four-way DNA junction at low-salt conditions: a fluorescence resonance energy transfer analysis

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=45291

57 Sequencing end-labeled DNA with base-specific chemical cleavages

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=45291

Frameshift mutations and the genetic code. This paper is dedicated to Professor Theodosius Dobzhansky on the occasion of his 66th birthday

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=45291

Role of a bulged A residue in a specific RNA-protein interaction

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=45291

Detection of nucleic acid hybridization by nonradiative fluorescence resonance energy transfer

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=45291

Unusual helical packing in crystals of DNA bearing a mutation hot spot

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=45291

The contrasting structures of mismatched DNA sequences containing looped-out bases (bulges) and multiple mismatches (bubbles).

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=45291

Deletions of bases in one strand of duplex DNA, in contrast to single-base mismatches, produce highly kinked molecules: possible relevance to the folding of single-stranded nucleic acids

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=45291

Evidence for several higher order structural elements in ribosomal RNA.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=45291

The stereochemistry of a four-way DNA junction: a theoretical study

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=45291

HIV-1 tat protein stimulates transcription by binding to a U-rich bulge in the stem of the TAR RNA structure

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=45291

Fluorescence resonance energy transfer and nucleic acids

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=45291

Fragments of the HIV-1 Tat protein specifically bind TAR RNA.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=45291

Solution structure of a trinucleotide A-T-A bulge loop within a DNA duplex

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=45291

Nuclear magnetic resonance study of a deoxyoligonucleotide duplex containing a three base bulge.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=45291

Conformational distributions of a four-way DNA junction revealed by time-resolved fluorescence resonance energy transfer.

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=45291

Analysis of fluorescence energy transfer in duplex and branched DNA molecules.

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=45291

Kinking of RNA helices by bulged bases, and the structure of the human immunodeficiency virus transactivator response element

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=45291

Fluorescence energy transfer shows that the four-way DNA junction is a right-handed cross of antiparallel molecules

24 September 2018

1 reference

12 December 2020

Bulge loops used to measure the helical twist of RNA in solution

1 reference

12 December 2020

Effects of bulge composition and flanking sequence on the kinking of DNA by bulged bases

1 reference

12 December 2020

Model for the interaction of DNA junctions and resolving enzymes

1 reference

12 December 2020

Visualization of diagnostic heteroduplex DNAs from cystic fibrosis deletion heterozygotes provides an estimate of the kinking of DNA by bulged bases

1 reference

12 December 2020

Fluorescence resonance energy transfer analysis of the structure of the four-way DNA junction

1 reference

12 December 2020

Optimised parameters for A-DNA and B-DNA

1 reference

12 December 2020

Structural model for an oligonucleotide containing a bulged guanosine by NMR and energy minimization

1 reference

12 December 2020

DNA bending by the bulge defect

1 reference

12 December 2020

RNA bulges and the helical periodicity of double-stranded RNA

1 reference

12 December 2020

Identifiers

DOI

10.1073/PNAS.91.24.11660

1 reference

11 August 2017

0 references

1 reference

11 August 2017

PubMed publication ID

7526401

1 reference