(Q35982802)

11 August 2017

Conserved and essential transcription factors for cellulase gene expression in ascomycete fungi (English)

1 reference

Putative cellobiose dehydrogenase

11 August 2017

0 references

Zn(II)2Cys6 transcription factor

0 references

Putative cellulose 1,4-beta-cellobiosidase

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Putative cellobiohydrolase

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Zn(II)2Cys6 transcription factor

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Ortholog(s) have mitochondrial outer membrane localization

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glucan 1,3-beta-glucosidase

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DNA mismatch repair protein MSH3

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hexose transporter

0 references

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periplasmic beta-glucosidase

0 references

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nitrogen catabolic enzyme regulatory protein

0 references

tetracycline transporter

0 references

endothiapepsin

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ferric reductase-4

0 references

pentose phosphate metabolism-9

0 references

xylosidase/arabinosidase

0 references

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rhamnogalacturonan acetylesterase

0 references

DUF1479 domain-containing protein

0 references

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zinc finger transcription factor-20

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carbohydrate esterase family 5-4

0 references

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protein disulfide-isomerase

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arabinogalactan endo-1,4-beta-galactosidase

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xylitol dehydrogenase-1

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Beta-mannosidase

0 references

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glycosylhydrolase family 61-7 protein

0 references

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disulfide isomerase-1

0 references

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triacylglycerol lipase, variant 1

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Triacylglycerol lipase

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Acetyl xylan esterase

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Beta-xylosidase

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transcription factor-26

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endoglucanase II

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endo-1,4-beta-xylanase A

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calreticulin

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Septal pore-associated protein 17

0 references

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starch binding domain-containing protein

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isoamyl alcohol oxidase-1

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aspartate aminotransferase

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aspartate aminotransferase, variant 1

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endo-beta-1,4-mannanase

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Short chain dehydrogenase

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alpha-N-arabinofuranosidase

0 references

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Septal pore-associated protein, putative

0 references

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pentose glucuronate interconversion-3

0 references

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solute carrier family 35 member B1 protein

0 references

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pH-response transcription factor pacC/RIM101

0 references

beta-glucosidase, variant 1

0 references

Beta-glucosidase

0 references

translocation complex component

0 references

cellobiose dehydrogenase

0 references

cholinesterase

0 references

calcium homeostasis protein Regucalcin

0 references

calcium homeostasis protein Regucalcin, variant 1

0 references

multidrug resistance protein MDR

0 references

0 references

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Endo-1,4-beta-xylanase

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fungal cellulose binding domain-containing protein

0 references

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0 references

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Acetyl xylan esterase

0 references

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beta-D-glucoside glucohydrolase

0 references

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endoglucanase IV

0 references

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C6 finger domain-containing protein

0 references

0 references

C6 finger domain-containing protein, variant 1

0 references

multi-drug resistance-12

0 references

sugar transporter-11

0 references

translocation protein Sec62

0 references

lipase-8

0 references

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Acetyl xylan esterase

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lipase-3

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hydroxybutyryl dehydrogenase-3

0 references

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Fructose-bisphosphate aldolase

0 references

ribose phosphate isomerase-1

0 references

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mitochondrial triosephosphate isomerase

0 references

Cellulose degradation regulator 2

0 references

appressorium formation-2

0 references

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transcriptional activator xlnR

0 references

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DNA-binding protein cre-1

0 references

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BNR/Asp-box repeat protein

0 references

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Beta-xylosidase

0 references

hypothetical protein, variant 1

0 references

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protein transporter SEC61 subunit alpha

0 references

endoglucanase IV

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Salicylate hydroxylase

0 references

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glycosyl hydrolase family 47 protein

0 references

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Glutathione S-transferase

0 references

glutathione S-transferase, variant 2

0 references

glutathione S-transferase, variant 1

0 references

0 references

0 references

0 references

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hypothetical protein, variant 1

0 references

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endo-1,4-beta-xylanase 2

0 references

monooxygenase

0 references

pentose phosphate metabolism-11

0 references

exoglucanase 3

0 references

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rhamnogalacturonase B

0 references

ABC transporter CDR4

0 references

membrane transporter

0 references

hypothetical protein, variant 1

0 references

0 references

glucose-regulated protein

0 references

lipase/esterase

0 references

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pectinesterase, variant 1

0 references

pectinesterase

0 references

Cel74a

0 references

Endo-1,4-beta-xylanase

0 references

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0 references

0 references

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0 references

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glutathione S-transferase-4

0 references

Chitin deacetylase

0 references

aldose epimerase-2

0 references

glycosylhydrolase family 36-1

0 references

0 references

0 references

0 references

0 references

0 references

0 references

0 references

fungal cellulose binding domain-containing protein

0 references

alpha-L-arabinofuranosidase 2

0 references

endoglucanase II

0 references

pectate lyase A

0 references

cellulose-binding protein

0 references

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Cytochrome P450 monooxygenase

0 references

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0 references

0 references

Samuel T Coradetti

1

1 reference

11 August 2017

James P Craig

2

1 reference

11 August 2017

Yi Xiong

3

1 reference

11 August 2017

Teresa Shock

4

1 reference

11 August 2017

Chaoguang Tian

5

1 reference

11 August 2017

N Louise Glass

6

1 reference

11 August 2017

language of work or name

English

0 references

publication date

24 April 2012

1 reference

Proceedings of the National Academy of Sciences of the United States of America

11 August 2017

1 reference

11 August 2017

109

1 reference

11 August 2017

19

1 reference

11 August 2017

7397-7402

1 reference

Induction of lignocellulose-degrading enzymes in Neurospora crassa by cellodextrins

11 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3358856

Deciphering transcriptional regulatory mechanisms associated with hemicellulose degradation in Neurospora crassa.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3358856

Plant cell walls to ethanol

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3358856

Identification of the CRE-1 cellulolytic regulon in Neurospora crassa

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3358856

Improving RNA-Seq expression estimates by correcting for fragment bias

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3358856

Differential expression analysis for sequence count data

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3358856

Cellodextrin transport in yeast for improved biofuel production

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3358856

Systems analysis of plant cell wall degradation by the model filamentous fungus Neurospora crassa

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3358856

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3358856

The search for the fungal tree of life

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3358856

Metabolic engineering strategies for the improvement of cellulase production by Hypocrea jecorina

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3358856

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3358856

The Carbohydrate-Active EnZymes database (CAZy): an expert resource for Glycogenomics

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3358856

Regulation of transcription of cellulases- and hemicellulases-encoding genes in Aspergillus niger and Hypocrea jecorina (Trichoderma reesei).

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3358856

Biomass recalcitrance: engineering plants and enzymes for biofuels production

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3358856

Xyr1 (xylanase regulator 1) regulates both the hydrolytic enzyme system and D-xylose metabolism in Hypocrea jecorina.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3358856

A fungal family of transcriptional regulators: the zinc cluster proteins

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3358856

A high-throughput gene knockout procedure for Neurospora reveals functions for multiple transcription factors

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3358856

The FunCat, a functional annotation scheme for systematic classification of proteins from whole genomes

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3358856

Sophorose as an inducer of cellulase in Trichoderma viride

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3358856

Induction of cellulase in fungi by cellobiose

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3358856

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3358856

Induction of cellulase in Trichoderma viride as influenced by carbon sources and metals.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3358856

The Fungal Genetics Stock Center: from molds to molecules.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3358856

The genome sequence of the filamentous fungus Neurospora crassa

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3358856

ACEI of Trichoderma reesei is a repressor of cellulase and xylanase expression

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3358856

Analysis of Relative Gene Expression Data Using Real-Time Quantitative PCR and the 2−ΔΔCT Method

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3358856

Neurospora from natural populations: a global study

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3358856

Two cellobiohydrolase-encoding genes from Aspergillus niger require D-xylose and the xylanolytic transcriptional activator XlnR for their expression

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3358856

Two adjacent protein binding motifs in the cbh2 (cellobiohydrolase II-encoding) promoter of the fungus Hypocrea jecorina (Trichoderma reesei) cooperate in the induction by cellulose.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3358856

The transcriptional activator XlnR regulates both xylanolytic and endoglucanase gene expression in Aspergillus niger.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3358856

Regulation of cellulase gene expression in the filamentous fungus Trichoderma reesei

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3358856

The Aspergillus PacC zinc finger transcription factor mediates regulation of both acid- and alkaline-expressed genes by ambient pH.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3358856

Oxidative cleavage of cellulose by fungal copper-dependent polysaccharide monooxygenases.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3358856

Cellobiose dehydrogenase and a copper-dependent polysaccharide monooxygenase potentiate cellulose degradation by Neurospora crassa

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3358856

Quantitative proteomic approach for cellulose degradation by Neurospora crassa

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3358856

Xyr1 regulates xylanase but not cellulase formation in the head blight fungus Fusarium graminearum.

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3358856

Role of the transcriptional activator xlnR of Fusarium oxysporum in regulation of xylanase genes and virulence.

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3358856

Timeline: Neurospora: a model of model microbes.

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3358856

ACEII, a novel transcriptional activator involved in regulation of cellulase and xylanase genes of Trichoderma reesei

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3358856

Regulation by carbon and nitrogen sources of a family of cellulases in Aspergillus nidulans

24 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22532664

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Fusion PCR and gene targeting in Aspergillus nidulans

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22532664

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1073/PNAS.1200785109

1 reference

11 August 2017

0 references

1 reference

11 August 2017

PubMed publication ID

22532664

1 reference