(Q35986052)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27065991%20AND%20SRC:MED&resulttype=core&format=json

1 April 2020

title

Rhizosphere Microbiomes of European + Seagrasses Are Selected by the Plant, But Are Not Species Specific (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27065991%20AND%20SRC:MED&resulttype=core&format=json

1 April 2020

0 references

1 reference

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27065991%20AND%20SRC:MED&resulttype=core&format=json

1 April 2020

Gerard Muyzer

series ordinal

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27065991%20AND%20SRC:MED&resulttype=core&format=json

1 April 2020

author name string

Catarina Cúcio

series ordinal

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27065991%20AND%20SRC:MED&resulttype=core&format=json

1 April 2020

Rodrigo Costa

series ordinal

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27065991%20AND%20SRC:MED&resulttype=core&format=json

1 April 2020

language of work or name

1 reference

31 March 2016

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27065991%20AND%20SRC:MED&resulttype=core&format=json

Frontiers in Microbiology

1 April 2020

published in

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27065991%20AND%20SRC:MED&resulttype=core&format=json

1 April 2020

volume

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27065991%20AND%20SRC:MED&resulttype=core&format=json

1 April 2020

page(s)

440

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27065991%20AND%20SRC:MED&resulttype=core&format=json

Sulfide Intrusion and Detoxification in the Seagrass Zostera marina

1 April 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4815253

Stability and succession of the rhizosphere microbiota depends upon plant type and soil composition

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4815253

Ecology and exploration of the rare biosphere

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4815253

Niche and host-associated functional signatures of the root surface microbiome.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4815253

STAMP: statistical analysis of taxonomic and functional profiles.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4815253

Rhizosphere heterogeneity shapes abundance and activity of sulfur-oxidizing bacteria in vegetated salt marsh sediments

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4815253

Rhizosphere microbiome assemblage is affected by plant development

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4815253

Going back to the roots: the microbial ecology of the rhizosphere

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4815253

Development of a dual-index sequencing strategy and curation pipeline for analyzing amplicon sequence data on the MiSeq Illumina sequencing platform.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4815253

The rhizosphere microbiome: significance of plant beneficial, plant pathogenic, and human pathogenic microorganisms.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4815253

Structure and functions of the bacterial microbiota of plants

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4815253

Revealing structure and assembly cues for Arabidopsis root-inhabiting bacterial microbiota.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4815253

Defining the core Arabidopsis thaliana root microbiome

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4815253

A Three-Stage Symbiosis Forms the Foundation of Seagrass Ecosystems

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4815253

The rhizosphere microbiome and plant health.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4815253

Global biogeography and quantitative seasonal dynamics of Gemmatimonadetes in soil

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4815253

Deciphering the rhizosphere microbiome for disease-suppressive bacteria

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4815253

Transitions in bacterial communities along the 2000 km salinity gradient of the Baltic Sea

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4815253

Search and clustering orders of magnitude faster than BLAST

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4815253

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4815253

QIIME allows analysis of high-throughput community sequencing data

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4815253

PyNAST: a flexible tool for aligning sequences to a template alignment

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4815253

Changes in community structure of sediment bacteria along the Florida coastal everglades marsh-mangrove-seagrass salinity gradient

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4815253

Plant-growth-promoting rhizobacteria

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4815253

Plant species and soil type cooperatively shape the structure and function of microbial communities in the rhizosphere

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4815253

Three genomes from the phylum Acidobacteria provide insight into the lifestyles of these microorganisms in soils

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4815253

Attached bacterial populations shared by four species of aquatic angiosperms

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4815253

Role of microorganisms in the evolution of animals and plants: the hologenome theory of evolution

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4815253

The ecology and biotechnology of sulphate-reducing bacteria.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4815253

Azospirillum zeae sp. nov., a diazotrophic bacterium isolated from rhizosphere soil of Zea mays.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4815253

Molecular analysis of the diversity of sulfate-reducing and sulfur-oxidizing prokaryotes in the environment, using aprA as functional marker gene

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4815253

Different bacterial communities associated with the roots and bulk sediment of the seagrass Zostera marina

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4815253

Host-specific regulation of symbiotic nitrogen fixation in Rhizobium leguminosarum biovar trifolii

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4815253

Sediminitomix flava gen. nov., sp. nov., of the phylum Bacteroidetes, isolated from marine sediment.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4815253

The role of microorganisms in coral health, disease and evolution

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4815253

Characterization of a marine gammaproteobacterium capable of aerobic anoxygenic photosynthesis

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4815253

The versatile epsilon-proteobacteria: key players in sulphidic habitats

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4815253

Diversity of bacteria and Archaea in sulphate-reducing enrichment cultures inoculated from serial dilution of Zostera noltii rhizosphere samples.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4815253

Dimethylsulfoniopropionate: its sources, role in the marine food web, and biological degradation to dimethylsulfide

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4815253

Molecular mechanisms of defense by rhizobacteria against root disease

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4815253

Root nodulation and infection factors produced by rhizobial bacteria.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4815253

Prokaryotic diversity in Zostera noltii-colonized marine sediments

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4815253

Elemental sulfur and thiosulfate disproportionation by Desulfocapsa sulfoexigens sp. nov., a new anaerobic bacterium isolated from marine surface sediment

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4815253

Anaerobic degradation of acetone by Desulfococcus biacutus spec. nov.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4815253

Growth of the photosynthetic bacterium Rhodopseudomonas capsulata chemoautotrophically in darkness with H2 as the energy source

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4815253

Microbial production and consumption of dimethyl sulfide (DMS) in a sea grass (Zostera noltii)-dominated marine intertidal sediment ecosystem (Bassin d'Arcachon, France).

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4815253

Monitoring polycyclic aromatic hydrocarbons in the Northeast Aegean Sea using Posidonia oceanica seagrass and synthetic passive samplers.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4815253

Antagonistic properties of seagrass associated Streptomyces sp. RAUACT-1: a source for anthraquinone rich compound

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4815253

Acetone production in solventogenic Clostridium species: new insights from non-enzymatic decarboxylation of acetoacetate.

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4815253

The ecology of Cytophaga-Flavobacteria in aquatic environments.

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4815253

Influence of temperature, salinity and E. coli tissue content on immune gene expression in mussel: results from a 2005-2008 survey

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4815253

High incidence of plant growth-stimulating bacteria associated with the rhizosphere of wheat grown on salinated soil in Uzbekistan

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4815253

Alkane biodegradation and dynamics of phylogenetic subgroups of sulfate-reducing bacteria in an anoxic coastal marine sediment artificially contaminated with oil.

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4815253

Analysis of bacterial communities in seagrass bed sediments by double-gradient denaturing gradient gel electrophoresis of PCR-amplified 16S rRNA genes.

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4815253

Nutrient fluxes in intertidal communities of a South European lagoon (Ria Formosa) – similarities and differences with a northern Wadden Sea bay (Sylt-Rømø Bay)

24 September 2018

1 reference

https://api.crossref.org/works/10.3389%2FFMICB.2016.00440

Oceanic phytoplankton, atmospheric sulphur, cloud albedo and climate

21 January 2018

1 reference

https://api.crossref.org/works/10.3389%2FFMICB.2016.00440

Effects of site and plant species on rhizosphere community structure as revealed by molecular analysis of microbial guilds

21 January 2018

1 reference

https://api.crossref.org/works/10.3389%2FFMICB.2016.00440

Plant-microbe interactions in seagrass meadows

21 January 2018

1 reference

https://api.crossref.org/works/10.3389%2FFMICB.2016.00440

Major role of marine vegetation on the oceanic carbon cycle

21 January 2018

1 reference

https://api.crossref.org/works/10.3389%2FFMICB.2016.00440

Seagrass ecosystems as a globally significant carbon stock

21 January 2018

1 reference

https://api.crossref.org/works/10.3389%2FFMICB.2016.00440

An approach to measurement of particle flux and sediment retention within seagrass (Posidonia oceanica) meadows

21 January 2018

1 reference

https://api.crossref.org/works/10.3389%2FFMICB.2016.00440

Seagrass sediments as a global carbon sink: Isotopic constraints

21 January 2018

1 reference

https://api.crossref.org/works/10.3389%2FFMICB.2016.00440

Bio-controlled thermostasis involving the sulfur cycle

21 January 2018

1 reference

https://api.crossref.org/works/10.3389%2FFMICB.2016.00440

A Scale of Grade and Class Terms for Clastic Sediments

21 January 2018

1 reference

https://api.crossref.org/works/10.3389%2FFMICB.2016.00440

Effects of sediment organic content and hydrodynamic conditions on the growth and distribution of Zostera marina

21 January 2018

1 reference

https://api.crossref.org/works/10.3389%2FFMICB.2016.00440

Phylogenetic diversity of sediment bacteria in the northern Bering Sea

21 January 2018

1 reference

https://api.crossref.org/works/10.3389%2FFMICB.2016.00440

Highlights in Seagrasses’ Phylogeny, Physiology, and Metabolism: What Makes Them Special?

21 January 2018

1 reference

https://api.crossref.org/works/10.3389%2FFMICB.2016.00440

Mineralization of organic matter in the sea bed—the role of sulphate reduction

21 January 2018

1 reference

https://api.crossref.org/works/10.3389%2FFMICB.2016.00440

Interaction of beggiatoa and rice plant: detoxification of hydrogen sulfide in the rice rhizosphere

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/27065991

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Bacterial fermentation of dimethyl-beta-propiothetin

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/27065991

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.3389/FMICB.2016.00440

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27065991%20AND%20SRC:MED&resulttype=core&format=json

1 April 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27065991%20AND%20SRC:MED&resulttype=core&format=json

1 April 2020

PubMed publication ID

27065991

1 reference