Home
Random
Nearby
Log in
Settings
Donate
About Wikidata
Disclaimers
Search
(Q36046088)
Watch
English
Bipartite Graphs for Visualization Analysis of Microbiome Data.
scientific article
In more languages
default values for all languages
No label defined
No description defined
edit
Statements
instance of
scholarly article
1 reference
stated in
Europe PubMed Central
PMC publication ID
4888752
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27279729%20AND%20SRC:MED&resulttype=core&format=json
retrieved
13 March 2020
title
Bipartite Graphs for Visualization Analysis of Microbiome Data
(English)
1 reference
stated in
Europe PubMed Central
PMC publication ID
4888752
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27279729%20AND%20SRC:MED&resulttype=core&format=json
retrieved
13 March 2020
main subject
microbiome
0 references
author
Karel Sedlar
series ordinal
1
1 reference
stated in
Europe PubMed Central
PMC publication ID
4888752
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27279729%20AND%20SRC:MED&resulttype=core&format=json
retrieved
13 March 2020
Helena Skutkova
series ordinal
3
1 reference
stated in
Europe PubMed Central
PMC publication ID
4888752
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27279729%20AND%20SRC:MED&resulttype=core&format=json
retrieved
13 March 2020
Ivo Provazník
series ordinal
5
1 reference
stated in
Europe PubMed Central
PMC publication ID
4888752
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27279729%20AND%20SRC:MED&resulttype=core&format=json
retrieved
13 March 2020
author name string
Petra Videnska
series ordinal
2
1 reference
stated in
Europe PubMed Central
PMC publication ID
4888752
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27279729%20AND%20SRC:MED&resulttype=core&format=json
retrieved
13 March 2020
Ivan Rychlik
series ordinal
4
1 reference
stated in
Europe PubMed Central
PMC publication ID
4888752
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27279729%20AND%20SRC:MED&resulttype=core&format=json
retrieved
13 March 2020
publication date
31 May 2016
1 reference
stated in
Europe PubMed Central
PMC publication ID
4888752
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27279729%20AND%20SRC:MED&resulttype=core&format=json
retrieved
13 March 2020
published in
Evolutionary Bioinformatics
1 reference
stated in
Europe PubMed Central
PMC publication ID
4888752
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27279729%20AND%20SRC:MED&resulttype=core&format=json
retrieved
13 March 2020
volume
12
1 reference
stated in
Europe PubMed Central
PMC publication ID
4888752
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27279729%20AND%20SRC:MED&resulttype=core&format=json
retrieved
13 March 2020
issue
Suppl 1
1 reference
stated in
Europe PubMed Central
PMC publication ID
4888752
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27279729%20AND%20SRC:MED&resulttype=core&format=json
retrieved
13 March 2020
page(s)
17-23
1 reference
stated in
Europe PubMed Central
PMC publication ID
4888752
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27279729%20AND%20SRC:MED&resulttype=core&format=json
retrieved
13 March 2020
describes a project that uses
Cytoscape
1 reference
stated in
Europe PubMed Central
retrieved
9 June 2022
reference URL
https://europepmc.org/search?query=(METHODS:'Cytoscape')
based on heuristic
inferred from PubMed Central ID database lookup
cites work
Insights from 20 years of bacterial genome sequencing
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4888752
retrieved
2 October 2017
Succession and replacement of bacterial populations in the caecum of egg laying hens over their whole life
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4888752
retrieved
2 October 2017
Characterization of egg laying hen and broiler fecal microbiota in poultry farms in Croatia, Czech Republic, Hungary and Slovenia.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4888752
retrieved
2 October 2017
ForceAtlas2, a continuous graph layout algorithm for handy network visualization designed for the Gephi software.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4888752
retrieved
2 October 2017
Evaluation of general 16S ribosomal RNA gene PCR primers for classical and next-generation sequencing-based diversity studies
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4888752
retrieved
2 October 2017
Microbial interactions: from networks to models
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4888752
retrieved
2 October 2017
Advancing analytical algorithms and pipelines for billions of microbial sequences
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4888752
retrieved
2 October 2017
Next generation sequencing and bioinformatic bottlenecks: the current state of metagenomic data analysis.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4888752
retrieved
2 October 2017
Introducing EzTaxon-e: a prokaryotic 16S rRNA gene sequence database with phylotypes that represent uncultured species
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4888752
retrieved
2 October 2017
Reproducibility and quantitation of amplicon sequencing-based detection
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4888752
retrieved
2 October 2017
Metagenomic analyses: past and future trends
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4888752
retrieved
2 October 2017
Search and clustering orders of magnitude faster than BLAST
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4888752
retrieved
2 October 2017
QIIME allows analysis of high-throughput community sequencing data
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4888752
retrieved
2 October 2017
Fast UniFrac: facilitating high-throughput phylogenetic analyses of microbial communities including analysis of pyrosequencing and PhyloChip data
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4888752
retrieved
2 October 2017
The metagenomics RAST server - a public resource for the automatic phylogenetic and functional analysis of metagenomes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4888752
retrieved
2 October 2017
Metagenomic and small-subunit rRNA analyses reveal the genetic diversity of bacteria, archaea, fungi, and viruses in soil
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4888752
retrieved
2 October 2017
Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4888752
retrieved
2 October 2017
MEGAN analysis of metagenomic data
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4888752
retrieved
2 October 2017
UniFrac: a new phylogenetic method for comparing microbial communities
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4888752
retrieved
2 October 2017
Basic local alignment search tool
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4888752
retrieved
2 October 2017
Identifiers
DOI
10.4137/EBO.S38546
1 reference
stated in
Europe PubMed Central
PMC publication ID
4888752
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27279729%20AND%20SRC:MED&resulttype=core&format=json
retrieved
13 March 2020
PMC publication ID
4888752
1 reference
stated in
Europe PubMed Central
PMC publication ID
4888752
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27279729%20AND%20SRC:MED&resulttype=core&format=json
retrieved
13 March 2020
PubMed publication ID
27279729
1 reference
stated in
Europe PubMed Central
PMC publication ID
4888752
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27279729%20AND%20SRC:MED&resulttype=core&format=json
retrieved
13 March 2020
Sitelinks
Wikipedia
(0 entries)
edit
Wikibooks
(0 entries)
edit
Wikinews
(0 entries)
edit
Wikiquote
(0 entries)
edit
Wikisource
(0 entries)
edit
Wikiversity
(0 entries)
edit
Wikivoyage
(0 entries)
edit
Wiktionary
(0 entries)
edit
Multilingual sites
(0 entries)
edit