(Q36069201)

12 August 2017

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title

Space as the final frontier in stochastic simulations of biological systems (English)

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12 August 2017

Caroline Lemerle

1

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12 August 2017

Barbara Di Ventura

series ordinal

2

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12 August 2017

Luis Serrano

series ordinal

3

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12 August 2017

language of work or name

English

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publication date

1 March 2005

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12 August 2017

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12 August 2017

volume

579

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12 August 2017

issue

8

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12 August 2017

page(s)

1789-1794

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Mathematical modeling of planar cell polarity to understand domineering nonautonomy.

12 August 2017

cites work

1 reference

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21 January 2018

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Whole-cell simulation: a grand challenge of the 21st century

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Computational imaging in cell biology

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A general computational framework for modeling cellular structure and function

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E-CELL: software environment for whole-cell simulation

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Stochastic simulation of chemical reactions with spatial resolution and single molecule detail.

21 January 2018

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STOCHSIM: modelling of stochastic biomolecular processes.

21 January 2018

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SmartCell, a framework to simulate cellular processes that combines stochastic approximation with diffusion and localisation: analysis of simple networks.

21 January 2018

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Modeling network dynamics: the lac operon, a case study.

21 January 2018

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Modelling cellular behaviour

21 January 2018

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Macromolecular crowding: obvious but underappreciated

21 January 2018

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Cytoarchitecture and physical properties of cytoplasm: volume, viscosity, diffusion, intracellular surface area

21 January 2018

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BioLingua: a programmable knowledge environment for biologists

21 January 2018

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The systems biology markup language (SBML): a medium for representation and exchange of biochemical network models

21 January 2018

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CellML: its future, present and past

21 January 2018

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Stochastic model of protein-protein interaction: why signaling proteins need to be colocalized

21 January 2018

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Automatic generation of cellular reaction networks with Moleculizer 1.0.

21 January 2018

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Reaction kinetics in intracellular environments with macromolecular crowding: simulations and rate laws

21 January 2018

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Modeling and simulation of intracellular dynamics: choosing an appropriate framework

21 January 2018

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A method for estimating stochastic noise in large genetic regulatory networks

21 January 2018

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Stochastic gene expression in a single cell

21 January 2018

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Summing up the noise in gene networks

21 January 2018

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Control, exploitation and tolerance of intracellular noise

21 January 2018

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The CyberCell Database (CCDB): a comprehensive, self-updating, relational database to coordinate and facilitate in silico modeling of Escherichia coli

21 January 2018

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Stochastic approaches for modelling in vivo reactions.

21 January 2018

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Modeling the topological organization of cellular processes.

21 January 2018

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A multi-algorithm, multi-timescale method for cell simulation

21 January 2018

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Adaptive stochastic-deterministic chemical kinetic simulations

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FEBSLET.2005.02.009

Simulation tools for biochemical networks: evaluation of performance and usability

21 January 2018

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https://api.crossref.org/works/10.1016%2FJ.FEBSLET.2005.02.009

Stochastic chemical kinetics and the quasi-steady-state assumption: Application to the Gillespie algorithm

21 January 2018

1 reference

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10.1016/J.FEBSLET.2005.02.009

21 January 2018

Identifiers

DOI

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12 August 2017

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