(Q36179432)

12 August 2017

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title

Challenges and opportunities for pathogen detection using DNA microarrays (English)

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12 August 2017

Douglas R Call

1

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PubMed ID

15988839

12 August 2017

language of work or name

English

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publication date

1 January 2005

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Critical Reviews in Microbiology

12 August 2017

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12 August 2017

31

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12 August 2017

2

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12 August 2017

91-99

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PubMed ID

15988839

describes a project that uses

12 August 2017

1 reference

Rapid Identification of Escherichia coli Pathotypes by Virulence Gene Detection with DNA Microarrays

1 reference

https://api.crossref.org/works/10.1080%2F10408410590921736

Discrimination among Listeria monocytogenes isolates using a mixed genome DNA microarray

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F10408410590921736

DNA amplification fingerprinting using very short arbitrary oligonucleotide primers

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F10408410590921736

Identifying Antimicrobial Resistance Genes with DNA Microarrays

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F10408410590921736

Mixed-genome microarrays reveal multiple serotype and lineage-specific differences among strains of Listeria monocytogenes

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F10408410590921736

Detection of bacterial pathogens in environmental samples using DNA microarrays

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F10408410590921736

Automated purification and suspension array detection of 16S rRNA from soil and sediment extracts by using tunable surface microparticles

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F10408410590921736

Sequence versus Structure for the Direct Detection of 16S rRNA on Planar Oligonucleotide Microarrays

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F10408410590921736

Microarray analysis of microbial virulence factors

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F10408410590921736

Detection and genotyping of human group A rotaviruses by oligonucleotide microarray hybridization

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F10408410590921736

Bacterial species determination from DNA-DNA hybridization by using genome fragments and DNA microarrays

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F10408410590921736

Whole genome comparison of Campylobacter jejuni human isolates using a low-cost microarray reveals extensive genetic diversity.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F10408410590921736

Quantitative, multiplexed detection of bacterial pathogens: DNA and protein applications of the Luminex LabMAP system.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F10408410590921736

Fluorescence-based fibre optic arrays: a universal platform for sensing

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F10408410590921736

Simultaneous detection of marine fish pathogens by using multiplex PCR and a DNA microarray.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F10408410590921736

Epidemiologic issues in the validation of veterinary diagnostic tests

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F10408410590921736

Direct fluorescence analysis of genetic polymorphisms by hybridization with oligonucleotide arrays on glass supports

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F10408410590921736

Diversity arrays: a solid state technology for sequence information independent genotyping

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F10408410590921736

Development of a sensitive DNA microarray suitable for rapid detection of Campylobacter spp.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F10408410590921736

Fingerprinting closely related xanthomonas pathovars with random nonamer oligonucleotide microarrays

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F10408410590921736

Amplicon secondary structure prevents target hybridization to oligonucleotide microarrays

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F10408410590921736

Molecular biology and DNA microarray technology for microbial quality monitoring of water

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F10408410590921736

Designing better probes: effect of probe size, mismatch position and number on hybridization in DNA oligonucleotide microarrays

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F10408410590921736

Multiplex SNP genotyping in pooled DNA samples by a four-colour microarray system

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F10408410590921736

PCR detection of specific pathogens in water: a risk-based analysis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F10408410590921736

SNP typing by apyrase-mediated allele-specific primer extension on DNA microarrays

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F10408410590921736

Detection of pathogenic Vibrio spp. in shellfish by using multiplex PCR and DNA microarrays

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F10408410590921736

Optimization strategies for DNA microarray-based detection of bacteria with 16S rRNA-targeting oligonucleotide probes

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F10408410590921736

Application and validation of DNA microarrays for the 16S rRNA-based analysis of marine bacterioplankton.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F10408410590921736

Nucleic acid scanning-by-hybridization of enterohemorrhagic Escherichia coli isolates using oligodeoxynucleotide arrays

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F10408410590921736

Direct detection of 16S rRNA in soil extracts by using oligonucleotide microarrays

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F10408410590921736

Genome sequence and comparative microarray analysis of serotype M18 group A Streptococcus strains associated with acute rheumatic fever outbreaks

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F10408410590921736

Bacterial separation and concentration from complex sample matrices: a review

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F10408410590921736

Towards a unified system for detecting waterborne pathogens

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F10408410590921736

Genotyping Cryptosporidium parvum with an hsp70 single-nucleotide polymorphism microarray

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F10408410590921736

Application of the 5' fluorogenic exonuclease assay (TaqMan) for quantitative ribosomal DNA and rRNA analysis in sediments

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F10408410590921736

Relationship of messenger RNA reverse transcriptase-polymerase chain reaction signal to Campylobacter spp. viability.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F10408410590921736

Distribution of repetitive DNA sequences in eubacteria and application to fingerprinting of bacterial genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F10408410590921736

Identification of Listeria species by microarray-based assay

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F10408410590921736

Nucleic acid amplification strategies for DNA microarray-based pathogen detection

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F10408410590921736

Microarray-based detection and genotyping of viral pathogens

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F10408410590921736

Simultaneous discrimination between 15 fish pathogens by using 16S ribosomal DNA PCR and DNA microarrays

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F10408410590921736

Quantitative oligonucleotide microarray fingerprinting of Salmonella enterica isolates

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F10408410590921736

Sequence-specific identification of 18 pathogenic microorganisms using microarray technology.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F10408410590921736

Development and evaluation of functional gene arrays for detection of selected genes in the environment

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F10408410590921736

Combining SSH and cDNA microarrays for rapid identification of differentially expressed genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F10408410590921736

Genome diversification in phylogenetic lineages I and II of Listeria monocytogenes: identification of segments unique to lineage II populations

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F10408410590921736

Microarrays for bacterial detection and microbial community analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F10408410590921736

Fabrication of DNA microarrays on nanoengineered polymeric ultrathin film prepared by self-assembly of polyelectrolyte multilayers

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F10408410590921736

Automated immunomagnetic separation and microarray detection of E. coli O157:H7 from poultry carcass rinse

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F10408410590921736

Detecting and genotyping Escherichia coli O157:H7 using multiplexed PCR and nucleic acid microarrays

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F10408410590921736

Evaluation of a PCR Probe Capture Assay for the Detection of Toxoplasma gondii

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F10408410590921736

Expression microarray hybridization kinetics depend on length of the immobilized DNA but are independent of immobilization substrate

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F10408410590921736

10.1080/10408410590921736

21 January 2018

Identifiers

DOI

1 reference

12 August 2017

1 reference

PubMed ID

15988839