(Q36279023)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8580842%20AND%20SRC:MED&resulttype=core&format=json

15 October 2019

title

A simple and fast approach to prediction of protein secondary structure from multiply aligned sequences with accuracy above 70% (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8580842%20AND%20SRC:MED&resulttype=core&format=json

protein structure prediction

15 October 2019

main subject

0 references

0 references

1 reference

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8580842%20AND%20SRC:MED&resulttype=core&format=json

15 October 2019

author name string

Heringa J

series ordinal

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8580842%20AND%20SRC:MED&resulttype=core&format=json

15 October 2019

Argos P

series ordinal

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8580842%20AND%20SRC:MED&resulttype=core&format=json

15 October 2019

publication date

1 December 1995

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8580842%20AND%20SRC:MED&resulttype=core&format=json

15 October 2019

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8580842%20AND%20SRC:MED&resulttype=core&format=json

15 October 2019

volume

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8580842%20AND%20SRC:MED&resulttype=core&format=json

15 October 2019

page(s)

2517-2525

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8580842%20AND%20SRC:MED&resulttype=core&format=json

15 October 2019

issue

12

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8580842%20AND%20SRC:MED&resulttype=core&format=json

Prediction of protein secondary structure at better than 70% accuracy

15 October 2019

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143048

The limits of protein secondary structure prediction accuracy from multiple sequence alignment.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143048

Prediction of protein secondary structure by combining nearest-neighbor algorithms and multiple sequence alignments

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143048

A comprehensive set of sequence analysis programs for the VAX

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143048

Conformational parameters for amino acids in helical, beta-sheet, and random coil regions calculated from proteins

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143048

Prediction of protein secondary structure and active sites using the alignment of homologous sequences

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143048

Prediction of secondary structure by evolutionary comparison: application to the alpha subunit of tryptophan synthase

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143048

Predicting the secondary structure of globular proteins using neural network models

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143048

Protein secondary structure prediction with a neural network

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143048

Improvements in protein secondary structure prediction by an enhanced neural network

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143048

Structural design and molecular evolution of a cytokine receptor superfamily

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143048

The protein structure code: what is its present status?

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143048

Secondary structure-based profiles: use of structure-conserving scoring tables in searching protein sequence databases for structural similarities

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143048

Patterns of divergence in homologous proteins as indicators of secondary and tertiary structure: a prediction of the structure of the catalytic domain of protein kinases

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143048

A Method to Identify Protein Sequences That Fold into a Known Three-Dimensional Structure

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143048

A data bank merging related protein structures and sequences

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143048

Prediction of structural and functional features of protein and nucleic acid sequences by artificial neural networks

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143048

Protein secondary structure prediction using logic-based machine learning

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143048

Conservation analysis and structure prediction of the SH2 family of phosphotyrosine binding domains

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143048

Analysis of the accuracy and implications of simple methods for predicting the secondary structure of globular proteins

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143048

Structural principles of the globular organization of protein chains. A stereochemical theory of globular protein secondary structure.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143048

Amino acid sequence analysis of the annexin super-gene family of proteins

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143048

Environment-specific amino acid substitution tables: tertiary templates and prediction of protein folds

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143048

Comparison of three algorithms for the assignment of secondary structure in proteins: the advantages of a consensus assignment.

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143048

Quantification of secondary structure prediction improvement using multiple alignments.

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143048

Hybrid system for protein secondary structure prediction

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143048

Further developments of protein secondary structure prediction using information theory. New parameters and consideration of residue pairs

22 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/8580842

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

The prediction and orientation of α-helices from sequence alignments: the combined use of environment-dependent substitution tables, Fourier transform methods and helix capping rules

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/8580842

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1002/PRO.5560041208

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8580842%20AND%20SRC:MED&resulttype=core&format=json

release_xmpexnkjr5cwlmlex4ooff6hay

15 October 2019

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/xmpexnkjr5cwlmlex4ooff6hay

mapped directly with Wikidata item

24 November 2022

based on heuristic

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8580842%20AND%20SRC:MED&resulttype=core&format=json

15 October 2019

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8580842%20AND%20SRC:MED&resulttype=core&format=json