(Q36279120)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:7613463%20AND%20SRC:MED&resulttype=core&format=json

21 October 2019

title

Proline cis-trans isomerization in staphylococcal nuclease: multi-substrate free energy perturbation calculations (English)

1 reference

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21 October 2019

5

1 reference

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21 October 2019

Luke M Rice

2

1 reference

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21 October 2019

Thomas Simonson

3

1 reference

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21 October 2019

author name string

A Hodel

1

1 reference

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21 October 2019

R O Fox

4

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21 October 2019

publication date

1 April 1995

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21 October 2019

1 reference

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21 October 2019

volume

4

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21 October 2019

issue

4

1 reference

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21 October 2019

page(s)

636-654

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:7613463%20AND%20SRC:MED&resulttype=core&format=json

Internal and interfacial dielectric properties of cytochrome c from molecular dynamics in aqueous solution

21 October 2019

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143107

Stabilization of a strained protein loop conformation through protein engineering

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143107

The crystal structure of the ternary complex of staphylococcal nuclease, Ca2+, and the inhibitor pdTp, refined at 1.65 A

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143107

Free energy via molecular simulation: applications to chemical and biomolecular systems

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143107

Tryptophan-47 rotational isomerization in variant-3 scorpion neurotoxin. A combination thermodynamic perturbation and umbrella sampling study

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143107

The crystal structure of staphylococcal nuclease refined at 1.7 A resolution

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143107

The Energy Landscapes and Motions of Proteins

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143107

Staphylococcal nuclease: Proposed mechanism of action based on structure of enzyme—thymidine 3′,5′-bisphosphate—calcium ion complex at 1.5-Å resolution

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143107

The importance of anchorage in determining a strained protein loop conformation

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143107

Comparing short protein substructures by a method based on backbone torsion angles.

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143107

Theoretical determination of conformational paths in citrate synthase

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143107

Conformational transitions using molecular dynamics with minimum biasing.

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143107

The loop problem in proteins: a Monte Carlo simulated annealing approach.

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143107

Fuzzy cluster analysis of molecular dynamics trajectories

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143107

Prediction of the folding of short polypeptide segments by uniform conformational sampling

22 September 2018

1 reference

12 December 2020

Microfolding: Conformational probability map for the alanine dipeptide in water from molecular dynamics simulations

1 reference

12 December 2020

A magnetization-transfer nuclear magnetic resonance study of the folding of staphylococcal nuclease

1 reference

12 December 2020

Conformational and helicoidal analysis of the molecular dynamics of proteins: "curves," dials and windows for a 50 psec dynamic trajectory of BPTI

1 reference

12 December 2020

Differential helix propensity of small apolar side chains studied by molecular dynamics simulations

1 reference

12 December 2020

Multiple conformations of a protein demonstrated by magnetization transfer NMR spectroscopy

1 reference

12 December 2020

Identifiers

DOI

10.1002/PRO.5560040405

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:7613463%20AND%20SRC:MED&resulttype=core&format=json

21 October 2019

1 reference

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21 October 2019

PubMed publication ID

7613463

1 reference