(Q36279917)

English

Improving the quality of NMR and crystallographic protein structures by means of a conformational database potential derived from structure databases

scientific article

In more languages

default for all languages

No label defined

No description defined

Statements

scholarly article

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

Improving the quality of NMR and crystallographic protein structures by means of a conformational database potential derived from structure databases (English)

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

0 references

protein structure

0 references

author name string

Kuszewski J

1

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

Gronenborn AM

2

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

Clore GM

3

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

publication date

1 June 1996

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

Protein Science

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

5

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

6

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

1067-1080

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

Crystallographic R factor refinement by molecular dynamics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143426

30 September 2017

Structures of protein complexes by multidimensional heteronuclear magnetic resonance spectroscopy

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143426

30 September 2017

Exploring the limits of precision and accuracy of protein structures determined by nuclear magnetic resonance spectroscopy.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143426

30 September 2017

Backbone-dependent rotamer library for proteins. Application to side-chain prediction

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143426

30 September 2017

Comparative protein modelling by satisfaction of spatial restraints

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143426

30 September 2017

Computational challenges for macromolecular structure determination by X-ray crystallography and solution NMR-spectroscopy

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143426

30 September 2017

The impact of direct refinement against three-bond HN-C alpha H coupling constants on protein structure determination by NMR.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143426

30 September 2017

Solution structure of carbonmonoxy myoglobin determined from nuclear magnetic resonance distance and chemical shift constraints

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143426

30 September 2017

The high-resolution three-dimensional solution structures of the oxidized and reduced states of human thioredoxin

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143426

30 September 2017

Molecular mechanics in biology: from structure to function, taking account of solvation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143426

30 September 2017

Refined solution structure of the oligomerization domain of the tumour suppressor p53

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143426

30 September 2017

The impact of direct refinement against proton chemical shifts on protein structure determination by NMR.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143426

30 September 2017

Molecular dynamics simulations of the glucocorticoid receptor DNA-binding domain in complex with DNA and free in solution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143426

30 September 2017

Hydration of proteins. A comparison of experimental residence times of water molecules solvating the bovine pancreatic trypsin inhibitor with theoretical model calculations

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143426

30 September 2017

Building proteins from C alpha coordinates using the dihedral probability grid Monte Carlo method

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143426

30 September 2017

De novo prediction of polypeptide conformations using dihedral probability grid Monte Carlo methodology

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143426

30 September 2017

Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143426

30 September 2017

Stereochemical criteria for polypeptide and protein chain conformations. 3. Helical and hydrogen-bonded polypeptide chains

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143426

30 September 2017

Determination of three-dimensional structures of proteins from interproton distance data by hybrid distance geometry-dynamical simulated annealing calculations

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143426

30 September 2017

Distance geometry and related methods for protein structure determination from NMR data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143426

30 September 2017

Determination of three-dimensional structures of proteins and nucleic acids in solution by nuclear magnetic resonance spectroscopy

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143426

30 September 2017

Temperature dependence of dynamics of hydrated myoglobin. Comparison of force field calculations with neutron scattering data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143426

30 September 2017

1H-NMR stereospecific assignments by conformational data-base searches

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143426

30 September 2017

An evaluation of computational strategies for use in the determination of protein structure from distance constraints obtained by nuclear magnetic resonance.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143426

30 September 2017

A 500 ps molecular dynamics simulation study of interleukin-1 beta in water. Correlation with nuclear magnetic resonance spectroscopy and crystallography.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143426

30 September 2017

Stereochemical quality of protein structure coordinates

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143426

30 September 2017

Sampling and efficiency of metric matrix distance geometry: a novel partial metrization algorithm.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143426

29 June 2018

Intrinsic phi, psi propensities of amino acids, derived from the coil regions of known structures

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143426

22 September 2018

Application of 1H NMR chemical shifts to measure the quality of protein structures

1 reference

https://pubmed.ncbi.nlm.nih.gov/8762138

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The use of position-specific rotamers in model building by homology

1 reference

https://pubmed.ncbi.nlm.nih.gov/8762138

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

1H-NMR analysis of turkey egg-white lysozyme and comparison with hen egg-white lysozyme

1 reference

https://pubmed.ncbi.nlm.nih.gov/8762138

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Comparison of the solution nuclear magnetic resonance and X-ray crystal structures of human recombinant interleukin-1β

1 reference

https://pubmed.ncbi.nlm.nih.gov/8762138

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Stereochemically restrained refinement of macromolecular structures

1 reference

https://pubmed.ncbi.nlm.nih.gov/8762138

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1002/PRO.5560050609

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

release_6e6hw32gzndklbpsxnqyzlbbu4

1 reference

https://api.fatcat.wiki/v0/release/6e6hw32gzndklbpsxnqyzlbbu4

24 November 2022

based on heuristic

mapped directly with Wikidata item

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

ResearchGate publication ID

0 references

Sitelinks

Wikipedia(0 entries)

Wikibooks(0 entries)

Wikinews(0 entries)

Wikiquote(0 entries)

Wikisource(0 entries)

Wikiversity(0 entries)

Wikivoyage(0 entries)

Wiktionary(0 entries)

Multilingual sites(0 entries)

Retrieved from "https://www.wikidata.org/w/index.php?title=Q36279917&oldid=1842511255"