(Q36280079)

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Conformational analysis of peptides corresponding to all the secondary structure elements of protein L B1 domain: secondary structure propensities are not conserved in proteins with the same fold

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scholarly article

1 reference

Europe PubMed Central

13 August 2017

Conformational analysis of peptides corresponding to all the secondary structure elements of protein L B1 domain: secondary structure propensities are not conserved in proteins with the same fold (English)

1 reference

Europe PubMed Central

13 August 2017

protein folding

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protein structure

0 references

author name string

Ramírez-Alvarado M

1

1 reference

Europe PubMed Central

13 August 2017

Serrano L

2

1 reference

Europe PubMed Central

13 August 2017

Blanco FJ

3

1 reference

Europe PubMed Central

13 August 2017

language of work or name

1 reference

based on heuristic

inferred from title

publication date

1 January 1997

1 reference

Europe PubMed Central

13 August 2017

Protein Science

1 reference

Europe PubMed Central

13 August 2017

6

1 reference

Europe PubMed Central

13 August 2017

1

1 reference

Europe PubMed Central

13 August 2017

162-174

1 reference

Europe PubMed Central

13 August 2017

Conformational investigation of designed short linear peptides able to fold into beta-hairpin structures in aqueous solution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143513

30 September 2017

Nonideality of water-hexafluoropropanol mixtures as studied by X-ray small angle scattering

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143513

30 September 2017

Peptide models of protein folding initiation sites. 2. The G-H turn region of myoglobin acts as a helix stop signal

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143513

30 September 2017

CD and 1H-NMR studies on the conformational properties of peptide fragments from the C-terminal domain of thermolysin.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143513

30 September 2017

Conformational behavior of Escherichia coli OmpA signal peptides in membrane mimetic environments

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143513

30 September 2017

Dissecting the structure of a partially folded protein. Circular dichroism and nuclear magnetic resonance studies of peptides from ubiquitin

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143513

30 September 2017

Investigation of the backbone dynamics of the IgG-binding domain of streptococcal protein G by heteronuclear two-dimensional 1H-15N nuclear magnetic resonance spectroscopy

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143513

30 September 2017

Three-dimensional solution structure of an immunoglobulin light chain-binding domain of protein L. Comparison with the IgG-binding domains of protein G

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143513

30 September 2017

Crystal structure of the C2 fragment of streptococcal protein G in complex with the Fc domain of human IgG

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143513

30 September 2017

Funnels, pathways, and the energy landscape of protein folding: a synthesis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143513

30 September 2017

Folding of protein G B1 domain studied by the conformational characterization of fragments comprising its secondary structure elements

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143513

30 September 2017

A short linear peptide derived from the N-terminal sequence of ubiquitin folds into a water-stable non-native beta-hairpin

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143513

30 September 2017

A phage display system for studying the sequence determinants of protein folding

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143513

30 September 2017

Optimization of rates of protein folding: the nucleation-condensation mechanism and its implications

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143513

30 September 2017

Principles that govern the folding of protein chains

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143513

30 September 2017

Conformation of peptide fragments of proteins in aqueous solution: implications for initiation of protein folding

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143513

30 September 2017

Folding of immunogenic peptide fragments of proteins in water solution. I. Sequence requirements for the formation of a reverse turn

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143513

30 September 2017

Calculation of protein extinction coefficients from amino acid sequence data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143513

30 September 2017

Dominant forces in protein folding

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143513

30 September 2017

A novel, highly stable fold of the immunoglobulin binding domain of streptococcal protein G

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143513

30 September 2017

Defining solution conformations of small linear peptides

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143513

30 September 2017

Folding of peptide fragments comprising the complete sequence of proteins. Models for initiation of protein folding. II. Plastocyanin

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143513

30 September 2017

Folding of peptide fragments comprising the complete sequence of proteins. Models for initiation of protein folding. I. Myohemerythrin

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143513

30 September 2017

Direct evidence for a two-state protein unfolding transition from hydrogen-deuterium exchange, mass spectrometry, and NMR.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143513

29 June 2018

The distribution of alpha-helix propensity along the polypeptide chain is not conserved in proteins from the same family

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143513

29 June 2018

Elucidating the folding problem of helical peptides using empirical parameters. II. Helix macrodipole effects and rational modification of the helical content of natural peptides.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143513

29 June 2018

Mapping of the immunoglobulin light chain-binding site of protein L.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143513

29 June 2018

Determination of the helix and beta form of proteins in aqueous solution by circular dichroism.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143513

29 June 2018

Local structures in unfolded lysozyme and correlation with secondary structures in the native conformation: helix-forming or -breaking propensity of peptide segments.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143513

29 June 2018

Kinetic analysis of folding and unfolding the 56 amino acid IgG-binding domain of streptococcal protein G.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143513

29 June 2018

Effect of trifluoroethanol on protein secondary structure: an NMR and CD study using a synthetic actin peptide

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143513

29 June 2018

Analysis of the effect of local interactions on protein stability.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143513

22 September 2018

Native-like beta-hairpin structure in an isolated fragment from ferredoxin: NMR and CD studies of solvent effects on the N-terminal 20 residues.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143513

22 September 2018

Peptide models of protein folding initiation sites. 1. Secondary structure formation by peptides corresponding to the G- and H-helices of myoglobin

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143513

22 September 2018

Thermodynamic genetics of the folding of the B1 immunoglobulin-binding domain from streptococcal protein G.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143513

22 September 2018

Elucidating the folding problem of helical peptides using empirical parameters.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143513

22 September 2018

Stabilization of the ribonuclease S-peptide alpha-helix by trifluoroethanol

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143513

21 October 2018

Secondary-structure dependent chemical shifts in proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143513

5 December 2018

Proton nuclear magnetic resonance sequential assignments and secondary structure of an immunoglobulin light chain-binding domain of protein L

1 reference

https://pubmed.ncbi.nlm.nih.gov/9007989

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Local structure due to an aromatic-amide interaction observed by 1H-nuclear magnetic resonance spectroscopy in peptides related to the N terminus of bovine pancreatic trypsin inhibitor

1 reference

https://pubmed.ncbi.nlm.nih.gov/9007989

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Helix stop and start signals in peptides and proteins. The capping box does not necessarily prevent helix elongation

1 reference

https://pubmed.ncbi.nlm.nih.gov/9007989

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Residual helical structure in the C-terminal fragment of cytochrome c

1 reference

https://pubmed.ncbi.nlm.nih.gov/9007989

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

De novo design and structural analysis of a model beta-hairpin peptide system

1 reference

https://pubmed.ncbi.nlm.nih.gov/9007989

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

NMR solution structure of the isolated N-terminal fragment of protein-G B1 domain. Evidence of trifluoroethanol induced native-like beta-hairpin formation

1 reference

https://pubmed.ncbi.nlm.nih.gov/9007989

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Local conformations of peptides representing the entire sequence of bovine pancreatic trypsin inhibitor and their roles in folding

1 reference

https://pubmed.ncbi.nlm.nih.gov/9007989

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Optimal local propensities for model proteins

1 reference

https://pubmed.ncbi.nlm.nih.gov/9007989

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Comparison of the three-dimensional structures of human, yeast, and oat ubiquitin

1 reference

https://pubmed.ncbi.nlm.nih.gov/9007989

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Backbone dynamics of a domain of protein L which binds to immunoglobulin light chains

1 reference

https://pubmed.ncbi.nlm.nih.gov/9007989

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

1 H NMR and CD evidence of the folding of the isolated ribonuclease 50-61 fragment

1 reference

https://pubmed.ncbi.nlm.nih.gov/9007989

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Helix-coil transition of the isolated amino terminus of ribonuclease

1 reference

https://pubmed.ncbi.nlm.nih.gov/9007989

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Similarity of Protein G and Ubiquitin

1 reference

https://pubmed.ncbi.nlm.nih.gov/9007989

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Conformational-transitions of bovine pancreatic ribonuclease S-peptide

1 reference

https://pubmed.ncbi.nlm.nih.gov/9007989

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Interactions Responsible for the pH Dependence of the beta-Hairpin Conformational Population Formed by a Designed Linear Peptide

1 reference

https://pubmed.ncbi.nlm.nih.gov/9007989

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Sequential resonance assignments as a basis for determination of spatial protein structures by high resolution proton nuclear magnetic resonance

1 reference

https://pubmed.ncbi.nlm.nih.gov/9007989

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1002/PRO.5560060119

1 reference

Europe PubMed Central

13 August 2017

1 reference

Europe PubMed Central

13 August 2017

1 reference

Europe PubMed Central

13 August 2017

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