(Q36328949)

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A bioinformatic filter for improved base-call accuracy and polymorphism detection using the Affymetrix GeneChip whole-genome resequencing platform

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scholarly article

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

A bioinformatic filter for improved base-call accuracy and polymorphism detection using the Affymetrix GeneChip whole-genome resequencing platform (English)

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

1 reference

based on heuristic

inferred from title

whole genome sequencing

1 reference

based on heuristic

inferred from title

author name string

Gagan A Pandya

1

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

Michael H Holmes

2

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

Sirisha Sunkara

3

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

Andrew Sparks

4

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

Yun Bai

5

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

Kathleen Verratti

6

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

Kelly Saeed

7

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

Pratap Venepally

8

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

Behnam Jarrahi

9

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

Robert D Fleischmann

10

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

Scott N Peterson

11

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Europe PubMed Central

PMC publication ID

13 August 2017

language of work or name

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publication date

15 November 2007

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

Nucleic Acids Research

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Europe PubMed Central

PMC publication ID

13 August 2017

35

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Europe PubMed Central

PMC publication ID

13 August 2017

21

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

e148

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

Comparative genomics and the evolution of prokaryotes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2175352

30 September 2017

GeneChip resequencing of the smallpox virus genome can identify novel strains: a biodefense application

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2175352

30 September 2017

Whole-genome re-sequencing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2175352

30 September 2017

Evaluation of affymetrix severe acute respiratory syndrome resequencing GeneChips in characterization of the genomes of two strains of coronavirus infecting humans

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2175352

30 September 2017

Insights on biology and evolution from microbial genome sequencing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2175352

30 September 2017

Use of resequencing oligonucleotide microarrays for identification of Streptococcus pyogenes and associated antibiotic resistance determinants.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2175352

30 September 2017

Genome analysis of multiple pathogenic isolates of Streptococcus agalactiae: implications for the microbial "pan-genome"

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2175352

30 September 2017

Chips and SNPs, bugs and thugs: a molecular sleuthing perspective

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2175352

30 September 2017

Microarray-based resequencing of multiple Bacillus anthracis isolates

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2175352

30 September 2017

Applications of DNA tiling arrays for whole-genome analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2175352

30 September 2017

Advanced sequencing technologies: methods and goals

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2175352

30 September 2017

The Human MitoChip: a high-throughput sequencing microarray for mitochondrial mutation detection.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2175352

30 September 2017

Tracking the evolution of the SARS coronavirus using high-throughput, high-density resequencing arrays

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2175352

30 September 2017

Expression profiling of the schizont and trophozoite stages of Plasmodium falciparum with a long-oligonucleotide microarray

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2175352

30 September 2017

Inferences from whole-genome sequences of bacterial pathogens

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2175352

30 September 2017

Comparative genome sequencing for discovery of novel polymorphisms in Bacillus anthracis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2175352

30 September 2017

Comprehensive human genome amplification using multiple displacement amplification

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2175352

30 September 2017

High-throughput variation detection and genotyping using microarrays

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2175352

30 September 2017

Rapid amplification of plasmid and phage DNA using Phi 29 DNA polymerase and multiply-primed rolling circle amplification

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2175352

30 September 2017

Primer3 on the WWW for general users and for biologist programmers

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2175352

30 September 2017

Alignment of whole genomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2175352

30 September 2017

Resequencing and mutational analysis using oligonucleotide microarrays

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2175352

30 September 2017

Two methods of whole-genome amplification enable accurate genotyping across a 2320-SNP linkage panel

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2175352

30 September 2017

Genome-wide single-nucleotide polymorphism arrays demonstrate high fidelity of multiple displacement-based whole-genome amplification.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2175352

22 September 2018

Assessment of multiple displacement amplification in molecular epidemiology

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2175352

22 September 2018

Accessing genetic information with high-density DNA arrays.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2175352

22 September 2018

The value of comparison

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKM918

21 January 2018

Identifiers

10.1093/NAR/GKM918

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

ResearchGate publication ID

0 references

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