(Q36363030)

English

Genome-wide analysis of tandem repeats in Tribolium castaneum genome reveals abundant and highly dynamic tandem repeat families with satellite DNA features in euchromatic chromosomal arms

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scholarly article

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

Genome-wide analysis of tandem repeats in Tribolium castaneum genome reveals abundant and highly dynamic tandem repeat families with satellite DNA features in euchromatic chromosomal arms (English)

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

red flour beetle

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1 reference

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author name string

Martina Pavlek

1

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

Yevgeniy Gelfand

2

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

Miroslav Plohl

3

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

Nevenka Meštrović

4

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

language of work or name

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publication date

1 October 2015

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Europe PubMed Central

PMC publication ID

13 August 2017

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Europe PubMed Central

PMC publication ID

13 August 2017

22

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Europe PubMed Central

PMC publication ID

13 August 2017

6

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

387-401

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

Correlated variation and population differentiation in satellite DNA abundance among lines of Drosophila melanogaster

1 reference

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30 September 2017

The organization and evolution of the Responder satellite in species of the Drosophila melanogaster group: dynamic evolution of a target of meiotic drive

1 reference

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30 September 2017

Tetris is a foldback transposon that provided the building blocks for an emerging satellite DNA of Drosophila virilis

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30 September 2017

Genomic characterization of large heterochromatic gaps in the human genome assembly.

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30 September 2017

Centromere identity from the DNA point of view

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4675708

30 September 2017

Tandem repeat-containing MITEs in the clam Donax trunculus

1 reference

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30 September 2017

Nucleosomes and centromeric DNA packaging.

1 reference

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30 September 2017

The CentO satellite confers translational and rotational phasing on cenH3 nucleosomes in rice centromeres

1 reference

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30 September 2017

The octamer is the major form of CENP-A nucleosomes at human centromeres

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4675708

30 September 2017

Tandem repeats derived from centromeric retrotransposons

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4675708

30 September 2017

Comparative analysis of tandem repeats from hundreds of species reveals unique insights into centromere evolution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4675708

30 September 2017

Satellite DNA-like elements associated with genes within euchromatin of the beetle Tribolium castaneum

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4675708

30 September 2017

jModelTest 2: more models, new heuristics and parallel computing

1 reference

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30 September 2017

Composition and organization of active centromere sequences in complex genomes

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4675708

30 September 2017

The evolution of African great ape subtelomeric heterochromatin and the fusion of human chromosome 2.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4675708

30 September 2017

Tandemly repeated DNA families in the mouse genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4675708

30 September 2017

BRCA1 tumour suppression occurs via heterochromatin-mediated silencing.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4675708

30 September 2017

Epigenetic effects of polymorphic Y chromosomes modulate chromatin components, immune response, and sexual conflict

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4675708

30 September 2017

Global sequence characterization of rice centromeric satellite based on oligomer frequency analysis in large-scale sequencing data

1 reference

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30 September 2017

New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4675708

30 September 2017

Extrachromosomal circles of satellite repeats and 5S ribosomal DNA in human cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4675708

30 September 2017

Altered heterochromatin binding by a hybrid sterility protein in Drosophila sibling species

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4675708

30 September 2017

Species-specific heterochromatin prevents mitotic chromosome segregation to cause hybrid lethality in Drosophila

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4675708

30 September 2017

Analysis of the largest tandemly repeated DNA families in the human genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4675708

30 September 2017

Survey of extrachromosomal circular DNA derived from plant satellite repeats

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4675708

30 September 2017

Analysis of repetitive DNA distribution patterns in the Tribolium castaneum genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4675708

30 September 2017

The genome of the model beetle and pest Tribolium castaneum

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4675708

30 September 2017

TRDB--the Tandem Repeats Database

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4675708

30 September 2017

Repbase Update, a database of eukaryotic repetitive elements

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4675708

30 September 2017

Progressive proximal expansion of the primate X chromosome centromere

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4675708

30 September 2017

A Simple, Fast, and Accurate Algorithm to Estimate Large Phylogenies by Maximum Likelihood

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4675708

30 September 2017

The structure of DNA in the nucleosome core

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4675708

30 September 2017

The regulatory regions required for B' paramutation and expression are located far upstream of the maize b1 transcribed sequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4675708

30 September 2017

Initial sequencing and analysis of the human genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4675708

30 September 2017

Insertion of beta-satellite repeats identifies a transmembrane protease causing both congenital and childhood onset autosomal recessive deafness

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4675708

30 September 2017

DnaSP version 3: an integrated program for molecular population genetics and molecular evolution analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4675708

30 September 2017

Tandem repeats finder: a program to analyze DNA sequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4675708

30 September 2017

A theoretical perusal of the satellite DNA curvature in tenebrionid beetles.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4675708

30 September 2017

Satellite DNA of the red flour beetle Tribolium castaneum--comparative study of satellites from the genus Tribolium

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4675708

30 September 2017

Satellite DNA as a driver of population divergence in the red flour beetle Tribolium castaneum.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4675708

28 June 2018

The evolutionary dynamics of alpha-satellite

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4675708

28 June 2018

Structure and population dynamics of the major satellite DNA in the red flour beetle Tribolium castaneum.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4675708

22 September 2018

The 1.688 repetitive DNA of Drosophila: concerted evolution at different genomic scales and association with genes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4675708

22 September 2018

Intragene higher order repeats in neuroblastoma breakpoint family genes distinguish humans from chimpanzees

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4675708

22 September 2018

Parallelism in evolution of highly repetitive DNAs in sibling species.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4675708

22 September 2018

Major evolutionary transitions in centromere complexity.

1 reference

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22 September 2018

Cytogenetics of chromosome rearrangements in Tribolium castaneum.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4675708

22 September 2018

Satellite DNA junctions identify the potential origin of new repetitive elements in the beetle Tribolium madens.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4675708

22 September 2018

Transcription and evolutionary dynamics of the centromeric satellite repeat CentO in rice.

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22 September 2018

Long inversely oriented subunits form a complex monomer of Tribolium brevicornis satellite DNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4675708

22 September 2018

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22 September 2018

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22 September 2018

A novel interspersed type of organization of satellite DNAs in Tribolium madens heterochromatin

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4675708

22 September 2018

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4675708

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Satellite DNA evolution

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https://api.crossref.org/works/10.1093%2FDNARES%2FDSV021

21 January 2018

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1 reference

https://api.crossref.org/works/10.1093%2FDNARES%2FDSV021

21 January 2018

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1 reference

https://api.crossref.org/works/10.1093%2FDNARES%2FDSV021

21 January 2018

Evolution of Repeated DNA Sequences by Unequal Crossover

1 reference

https://api.crossref.org/works/10.1093%2FDNARES%2FDSV021

21 January 2018

Modern maize varieties going local in the semi-arid zone in Tanzania

1 reference

https://api.crossref.org/works/10.1093%2FDNARES%2FDSV021

21 January 2018

The roles of the monomer length and nucleotide context of plant tandem repeats in nucleosome positioning

1 reference

https://pubmed.ncbi.nlm.nih.gov/26428853

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Sequence homogenization and chromosomal localization of VicTR-B satellites differ between closely related Vicia species

1 reference

https://pubmed.ncbi.nlm.nih.gov/26428853

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The role of unequal crossover in alpha-satellite DNA evolution: a computational analysis

1 reference

https://pubmed.ncbi.nlm.nih.gov/26428853

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1093/DNARES/DSV021

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

ResearchGate publication ID

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