(Q36398105)

13 August 2017

Energy landscape of knotted protein folding (English)

1 reference

13 August 2017

0 references

1 reference

Joanna I Sułkowska

1

1 reference

13 August 2017

Jeffrey K Noel

series ordinal

2

1 reference

13 August 2017

Jose N Onuchic

series ordinal

3

1 reference

13 August 2017

language of work or name

English

0 references

publication date

13 August 2012

1 reference

Proceedings of the National Academy of Sciences of the United States of America

13 August 2017

1 reference

13 August 2017

109

1 reference

13 August 2017

44

1 reference

13 August 2017

17783-17788

1 reference

Conservation of complex knotting and slipknotting patterns in proteins

13 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3497829

Structure and folding of a designed knotted protein

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3497829

Slipknotting upon native-like loop formation in a trefoil knot protein

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3497829

The energy landscape, folding pathways and the kinetics of a knotted protein

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3497829

SMOG@ctbp: simplified deployment of structure-based models in GROMACS

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3497829

Experimental detection of knotted conformations in denatured proteins

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3497829

A Stevedore's protein knot

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3497829

Dodging the crisis of folding proteins with knots

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3497829

Localizing frustration in native proteins and protein assemblies

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3497829

The folding mechanics of a knotted protein

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3497829

Statistics of knots, geometry of conformations, and evolution of proteins

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3497829

Theory of protein folding

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3497829

Protein topology determines binding mechanism

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3497829

A deeply knotted protein structure and how it might fold.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3497829

Intragenic deletion in the gene encoding ubiquitin carboxy-terminal hydrolase in gad mice

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3497829

Protein folding transition states probed by loop extension

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3497829

The ubiquitin pathway in Parkinson's disease

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3497829

Crystal structure of the methyltransferase domain of human TARBP1.

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3497829

Identification of rare slipknots in proteins and their implications for stability and folding

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3497829

Topological frustration and the folding of interleukin-1 beta

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3497829

Quantifying the roughness on the free energy landscape: entropic bottlenecks and protein folding rates

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3497829

Roles of native topology and chain-length scaling in protein folding: a simulation study with a Go-like model.

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3497829

Topological and energetic factors: what determines the structural details of the transition state ensemble and "en-route" intermediates for protein folding? An investigation for small globular proteins

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3497829

Are there knots in proteins?

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3497829

Glutamine, alanine or glycine repeats inserted into the loop of a protein have minimal effects on stability and folding rates

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3497829

Loop length, intramolecular diffusion and protein folding

21 October 2018

1 reference

Crossref

https://api.crossref.org/works/10.1073%2FPNAS.1201804109

Loop length, intramolecular diffusion and protein folding

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3497829

Predicting atomic details of the unfolding pathway for YibK, a knotted protein from the SPOUT superfamily

21 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22891304

12 December 2020

inferred from PubMed ID database lookup

The folding of knotted proteins: insights from lattice simulations

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22891304

12 December 2020

inferred from PubMed ID database lookup

Knot formation in newly translated proteins is spontaneous and accelerated by chaperonins

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22891304

12 December 2020

inferred from PubMed ID database lookup

Identifiers

DOI

10.1073/PNAS.1201804109

1 reference

release_yydc4oa2wve5rhfoljrgptfsjm

13 August 2017

0 references

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/yydc4oa2wve5rhfoljrgptfsjm

24 November 2022

mapped directly with Wikidata item

1 reference

13 August 2017

PubMed publication ID

22891304

1 reference