(Q36416193)

English

Large-scale survey of cytosine methylation of retrotransposons and the impact of readout transcription from long terminal repeats on expression of adjacent rice genes.

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scholarly article

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Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18073417%20AND%20SRC:MED&resulttype=core&format=json

29 December 2019

Large-scale survey of cytosine methylation of retrotransposons and the impact of readout transcription from long terminal repeats on expression of adjacent rice genes (English)

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18073417%20AND%20SRC:MED&resulttype=core&format=json

29 December 2019

retrotransposon

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Khalil Kashkush

1

1 reference

Europe PubMed Central

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29 December 2019

author name string

Vadim Khasdan

2

1 reference

Europe PubMed Central

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29 December 2019

language of work or name

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publication date

1 December 2007

1 reference

Europe PubMed Central

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29 December 2019

1 reference

Europe PubMed Central

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29 December 2019

177

1 reference

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29 December 2019

4

1 reference

Europe PubMed Central

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29 December 2019

1975-1985

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18073417%20AND%20SRC:MED&resulttype=core&format=json

29 December 2019

CpG methylation directly regulates transcriptional activity of the human endogenous retrovirus family HERV-K(HML-2)

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2219487

30 September 2017

Silencing of transposons in plant genomes: kick them when they're down

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2219487

30 September 2017

Complex patterns of transcription at the insertion site of a retrotransposon in the mouse.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2219487

30 September 2017

Silencing of a gene adjacent to the breakpoint of a widespread Drosophila inversion by a transposon-induced antisense RNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2219487

30 September 2017

Large-scale determination of the methylation status of retrotransposons in different tissues using a methylation tags approach.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2219487

30 September 2017

Genes and transposons are differentially methylated in plants, but not in mammals

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2219487

30 September 2017

Transcriptional regulation of the human LINE-1 retrotransposon L1.2B.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2219487

30 September 2017

Epigenetic regulation of gene expression: how the genome integrates intrinsic and environmental signals

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2219487

30 September 2017

Dasheng and RIRE2. A nonautonomous long terminal repeat element and its putative autonomous partner in the rice genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2219487

30 September 2017

Gene silencing in mammalian cells and the spread of DNA methylation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2219487

30 September 2017

Dasheng: a recently amplified nonautonomous long terminal repeat element that is a major component of pericentromeric regions in rice

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2219487

30 September 2017

Plant transposable elements: where genetics meets genomics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2219487

30 September 2017

Gene loss, silencing and activation in a newly synthesized wheat allotetraploid.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2219487

30 September 2017

Sequence elimination and cytosine methylation are rapid and reproducible responses of the genome to wide hybridization and allopolyploidy in wheat

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2219487

30 September 2017

Mobilization of transposons by a mutation abolishing full DNA methylation in Arabidopsis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2219487

30 September 2017

Robertson's Mutator transposons in A. thaliana are regulated by the chromatin-remodeling gene Decrease in DNA Methylation (DDM1).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2219487

30 September 2017

The MITE family heartbreaker (Hbr): molecular markers in maize

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2219487

30 September 2017

Plant retrotransposons

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2219487

30 September 2017

Inactivation of gene expression in plants as a consequence of specific sequence duplication

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2219487

30 September 2017

Differential expression of a new dominant agouti allele (Aiapy) is correlated with methylation state and is influenced by parental lineage

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2219487

30 September 2017

A reagent for the single-step simultaneous isolation of RNA, DNA and proteins from cell and tissue samples.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2219487

30 September 2017

AFLP: a new technique for DNA fingerprinting

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2219487

30 September 2017

Eukaryotic transposable elements and genome evolution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2219487

30 September 2017

Somatically heritable switches in the DNA modification of Mu transposable elements monitored with a suppressible mutant in maize

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2219487

30 September 2017

Expression analyses of human endogenous retroviruses (HERVs): tissue-specific and developmental stage-dependent expression of HERVs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2219487

21 September 2018

Detection of retroviral antisense transcripts and promoter activity of the HERV-K(C4) insertion in the MHC class III region

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2219487

21 September 2018

Remodeling of DNA methylation and phenotypic and transcriptional changes in synthetic Arabidopsis allotetraploids

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2219487

21 September 2018

Do Plants Have a One-Way Ticket to Genomic Obesity?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2219487

21 October 2018

Transcriptional activation of retrotransposons alters the expression of adjacent genes in wheat

1 reference

https://pubmed.ncbi.nlm.nih.gov/18073417

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Active maize genes are unmodified and flanked by diverse classes of modified, highly repetitive DNA

1 reference

https://pubmed.ncbi.nlm.nih.gov/18073417

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Solitary HERV-K LTRs possess bi-directional promoter activity and contain a negative regulatory element in the U5 region

1 reference

https://pubmed.ncbi.nlm.nih.gov/18073417

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Transposons, DNA methylation and gene control

1 reference

https://pubmed.ncbi.nlm.nih.gov/18073417

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Patterns of cytosine methylation in an elite rice hybrid and its parental lines, detected by a methylation-sensitive amplification polymorphism technique

1 reference

https://pubmed.ncbi.nlm.nih.gov/18073417

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1534/GENETICS.107.080234

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18073417%20AND%20SRC:MED&resulttype=core&format=json

29 December 2019

release_geqk7olc3zgy5ipo3dz2cug334

1 reference

https://api.fatcat.wiki/v0/release/geqk7olc3zgy5ipo3dz2cug334

24 November 2022

based on heuristic

mapped directly with Wikidata item

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18073417%20AND%20SRC:MED&resulttype=core&format=json

29 December 2019

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18073417%20AND%20SRC:MED&resulttype=core&format=json

29 December 2019

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