(Q36435123)

14 August 2017

Kinetic and thermodynamic characterization of the reaction pathway of box H/ACA RNA-guided pseudouridine formation (English)

1 reference

14 August 2017

Xinxing Yang

1

1 reference

14 August 2017

Jingqi Duan

2

1 reference

14 August 2017

Shuang Li

3

1 reference

14 August 2017

Peng Wang

4

1 reference

14 August 2017

Shoucai Ma

5

1 reference

14 August 2017

Keqiong Ye

6

1 reference

14 August 2017

Xin Sheng Zhao

7

1 reference

14 August 2017

language of work or name

English

0 references

publication date

24 September 2012

1 reference

14 August 2017

Nucleic Acids Research

1 reference

14 August 2017

40

1 reference

14 August 2017

21

1 reference

14 August 2017

10925-10936

1 reference

Creative Commons Attribution 3.0 Unported

14 August 2017

start time

7 November 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

Reconstitution and structural analysis of the yeast box H/ACA RNA-guided pseudouridine synthase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3510513

The box C/D and H/ACA snoRNPs: key players in the modification, processing and the dynamic folding of ribosomal RNA.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3510513

Pre-steady-state kinetic analysis of the three Escherichia coli pseudouridine synthases TruB, TruA, and RluA reveals uniformly slow catalysis

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3510513

Structures of ribonucleoprotein particle modification enzymes.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3510513

Glycosidic Bond Conformation Preference Plays a Pivotal Role in Catalysis of RNA Pseudouridylation: A Combined Simulation and Structural Study

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3510513

Functional and Structural Impact of Target Uridine Substitutions on the H/ACA Ribonucleoprotein Particle Pseudouridine Synthase,

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3510513

Box H/ACA small ribonucleoproteins

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3510513

Structural mechanism of substrate RNA recruitment in H/ACA RNA-guided pseudouridine synthase

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3510513

Structure of a functional ribonucleoprotein pseudouridine synthase bound to a substrate RNA

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3510513

Substrate RNA positioning in the archaeal H/ACA ribonucleoprotein complex

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3510513

H/ACA guide RNAs, proteins and complexes

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3510513

Solution structure of an rRNA substrate bound to the pseudouridylation pocket of a box H/ACA snoRNA

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3510513

H/ACA small nucleolar RNA pseudouridylation pockets bind substrate RNA to form three-way junctions that position the target U for modification

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3510513

30 September 2017

Pseudouridine synthases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3510513

Crystal structure determination and site-directed mutagenesis of the Pyrococcus abyssi aCBF5-aNOP10 complex reveal crucial roles of the C-terminal domains of both proteins in H/ACA sRNP activity

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3510513

Reconstitution of archaeal H/ACA small ribonucleoprotein complexes active in pseudouridylation

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3510513

RNA-guided RNA modification: functional organization of the archaeal H/ACA RNP

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3510513

The pseudouridine synthases: revisiting a mechanism that seemed settled

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3510513

Cocrystal structure of a tRNA Psi55 pseudouridine synthase: nucleotide flipping by an RNA-modifying enzyme

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3510513

The mechanism of pseudouridine synthase I as deduced from its interaction with 5-fluorouracil-tRNA.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3510513

Point mutations in yeast CBF5 can abolish in vivo pseudouridylation of rRNA

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3510513

A small nucleolar RNP protein is required for pseudouridylation of eukaryotic ribosomal RNAs

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3510513

Site-specific pseudouridine formation in preribosomal RNA is guided by small nucleolar RNAs

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3510513

Long-distance placement of substrate RNA by H/ACA proteins

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3510513

The Cbf5-Nop10 complex is a molecular bracket that organizes box H/ACA RNPs.

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3510513

A conserved aspartate of tRNA pseudouridine synthase is essential for activity and a probable nucleophilic catalyst

28 June 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKS882

The products of 5-fluorouridine by the action of the pseudouridine synthase TruB disfavor one mechanism and suggest another

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKS882

Crystal structure of a Cbf5-Nop10-Gar1 complex and implications in RNA-guided pseudouridylation and dyskeratosis congenita.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKS882

Crystal structure of an H/ACA box ribonucleoprotein particle.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKS882

Direct measurement of the rates and barriers on forward and reverse diffusions of intramolecular collision in overhang oligonucleotides

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKS882

21 January 2018

Identifiers

DOI

10.1093/NAR/GKS882

1 reference

release_riuutoxslndaddgrygxqttyvoq

14 August 2017

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/riuutoxslndaddgrygxqttyvoq

mapped directly with Wikidata item

24 November 2022

based on heuristic

1 reference

14 August 2017

PubMed publication ID

23012266

1 reference