(Q36440846)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10449802%20AND%20SRC:MED&resulttype=core&format=json

11 December 2019

title

Mapping the molecular determinant of pathogenicity in a hammerhead viroid: a tetraloop within the in vivo branched RNA conformation (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10449802%20AND%20SRC:MED&resulttype=core&format=json

11 December 2019

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10449802%20AND%20SRC:MED&resulttype=core&format=json

11 December 2019

Beatriz Navarro

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10449802%20AND%20SRC:MED&resulttype=core&format=json

11 December 2019

Ricardo Flores

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10449802%20AND%20SRC:MED&resulttype=core&format=json

11 December 2019

author name string

M de la Peña

1

1 reference

14 August 2017

B Navarro

2

1 reference

14 August 2017

R Flores

3

1 reference

14 August 2017

language of work or name

English

0 references

publication date

1 August 1999

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10449802%20AND%20SRC:MED&resulttype=core&format=json

Proceedings of the National Academy of Sciences of the United States of America

11 December 2019

published in

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10449802%20AND%20SRC:MED&resulttype=core&format=json

11 December 2019

volume

96

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10449802%20AND%20SRC:MED&resulttype=core&format=json

11 December 2019

issue

17

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10449802%20AND%20SRC:MED&resulttype=core&format=json

11 December 2019

page(s)

9960-9965

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10449802%20AND%20SRC:MED&resulttype=core&format=json

Genomic structure of three phenotypically different isolates of peach latent mosaic viroid: implications of the existence of constraints limiting the heterogeneity of viroid quasispecies

11 December 2019

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22318

Chrysanthemum chlorotic mottle viroid: unusual structural properties of a subgroup of self-cleaving viroids with hammerhead ribozymes.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22318

Plant pathogenic RNAs and RNA catalysis

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22318

A network of heterogeneous hydrogen bonds in GNRA tetraloops

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22318

Lessons from an evolving rRNA: 16S and 23S rRNA structures from a comparative perspective.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22318

Replication of avocado sunblotch viroid: evidence for a symmetric pathway with two rolling circles and hammerhead ribozyme processing.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22318

Domains in viroids: evidence of intermolecular RNA rearrangements and their contribution to viroid evolution

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22318

Self-cleavage of plus and minus RNA transcripts of avocado sunblotch viroid

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22318

Eleven new sequence variants of citrus exocortis viroid and the correlation of sequence with pathogenicity

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22318

Architecture of ribosomal RNA: constraints on the sequence of "tetra-loops"

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22318

Characterization of self-cleavage of viroid and virusoid RNAs

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22318

Numbering system for the hammerhead

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22318

Plus and minus RNAs of peach latent mosaic viroid self-cleave in vitro via hammerhead structures

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22318

Identification of multiple structural domains regulating viroid pathogenicity

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22318

Nucleotide sequence and secondary structure of potato spindle tuber viroid

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22318

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22318

Correlation between structure and pathogenicity of potato spindle tuber viroid (PSTV).

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22318

2' phosphomonoester, 3'-5' phosphodiester bond at a unique site in a circular viral RNA.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22318

Replication of in vitro constructed viroid mutants: location of the pathogenicity-modulating domain of citrus exocortis viroid.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22318

Correlation between bending of the VM region and pathogenicity of different Potato Spindle Tuber Viroid strains

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22318

A proposed scheme for viroid classification and nomenclature.

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22318

Viroid processing: switch from cleavage to ligation is driven by a change from a tetraloop to a loop E conformation

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22318

A highly efficient procedure for site-specific mutagenesis of full-length plasmids using Vent DNA polymerase.

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22318

Comparative sequence studies of variants of avocado sunblotch viroid

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22318

Tetraloops and RNA folding

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22318

Ribosomal RNA identity elements for ricin A-chain recognition and catalysis. Analysis with tetraloop mutants

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22318

A severe and a mild potato spindle tuber viroid isolate differ in three nucleotide exchanges only

28 June 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.96.17.9960

RNA structural features responsible for potato spindle tuber viroid pathogenicity.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.96.17.9960

Model for an RNA tertiary interaction from the structure of an intermolecular complex between a GAAA tetraloop and an RNA helix.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.96.17.9960

Regulation of pathogenicity in hop stunt viroid-related group II citrus viroids

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.96.17.9960

Analysis of the population structure of three phenotypically different PSTVd isolates.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22318

Viroids: The Noncoding Genomes

21 September 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.96.17.9960

Comparison of multimeric plus and minus forms of viroids and virusoids

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.96.17.9960

Detection of citrus exocortis viroid in crude extracts by dot-blot hybridization: conditions for reducing spurious hybridization results and for enhancing the sensitivity of the technique

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.96.17.9960

Secondary structure probing of potato spindle tuber viroid (PSTVd) and sequence comparison with other small pathogenic RNA replicons provides evidence for central non-canonical base-pairs, large A-rich loops, and a terminal branch

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/10449802

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1073/PNAS.96.17.9960

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10449802%20AND%20SRC:MED&resulttype=core&format=json

11 December 2019

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10449802%20AND%20SRC:MED&resulttype=core&format=json

11 December 2019

1 reference