(Q36443377)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26420830%20AND%20SRC:MED&resulttype=core&format=json

25 February 2020

title

DnaC traps DnaB as an open ring and remodels the domain that binds primase (English)

1 reference

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25 February 2020

2

1 reference

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25 February 2020

author name string

Sundari Chodavarapu

series ordinal

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26420830%20AND%20SRC:MED&resulttype=core&format=json

25 February 2020

Michael Feig

series ordinal

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26420830%20AND%20SRC:MED&resulttype=core&format=json

25 February 2020

Jon M Kaguni

series ordinal

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26420830%20AND%20SRC:MED&resulttype=core&format=json

25 February 2020

language of work or name

English

0 references

publication date

29 September 2015

1 reference

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25 February 2020

published in

Nucleic Acids Research

1 reference

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25 February 2020

volume

44

1 reference

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25 February 2020

issue

1

1 reference

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25 February 2020

page(s)

210-220

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26420830%20AND%20SRC:MED&resulttype=core&format=json

Creative Commons Attribution 4.0 International

25 February 2020

copyright license

start time

14 November 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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1 reference

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Nucleotide and Partner-Protein Control of Bacterial Replicative Helicase Structure and Function

30 September 2017

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Structure of a helicase–helicase loader complex reveals insights into the mechanism of bacterial primosome assembly

30 September 2017

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The minichromosome maintenance replicative helicase

30 September 2017

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Principles and concepts of DNA replication in bacteria, archaea, and eukarya

30 September 2017

1 reference

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Helicase loading at chromosomal origins of replication

30 September 2017

1 reference

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The bacterial DnaC helicase loader is a DnaB ring breaker

30 September 2017

1 reference

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Replication clamps and clamp loaders.

30 September 2017

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The hexameric helicase DnaB adopts a nonplanar conformation during translocation.

30 September 2017

1 reference

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DNA stretching by bacterial initiators promotes replication origin opening

30 September 2017

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Dynamic coupling between the motors of DNA replication: hexameric helicase, DNA polymerase, and primase

30 September 2017

1 reference

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Primase directs the release of DnaC from DnaB

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4705694

Molecular interplay between the replicative helicase DnaC and its loader protein DnaI from Geobacillus kaustophilus

30 September 2017

1 reference

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The crystal structure of a replicative hexameric helicase DnaC and its complex with single-stranded DNA

30 September 2017

1 reference

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Structural Synergy and Molecular Crosstalk between Bacterial Helicase Loaders and Replication Initiators

30 September 2017

1 reference

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The structure of a DnaB-family replicative helicase and its interactions with primase

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4705694

Structure of hexameric DnaB helicase and its complex with a domain of DnaG primase

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4705694

The crystal structure of the Thermus aquaticus DnaB helicase monomer

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4705694

Regulation of bacterial priming and daughter strand synthesis through helicase-primase interactions

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4705694

Semi-automated data processing of hydrogen exchange mass spectra using HX-Express

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4705694

Identification and characterization of EX1 kinetics in H/D exchange mass spectrometry by peak width analysis

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4705694

An alternative clamp loading pathway via the T4 clamp loader gp44/62-DNA complex.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4705694

Hydrogen exchange mass spectrometry for the analysis of protein dynamics

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4705694

DnaG interacts with a linker region that joins the N- and C-domains of DnaB and induces the formation of 3-fold symmetric rings

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4705694

Conserved arginine residues implicated in ATP hydrolysis, nucleotide-sensing, and inter-subunit interactions in AAA and AAA+ ATPases.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4705694

Evolutionary history and higher order classification of AAA+ ATPases

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4705694

Protein analysis by hydrogen exchange mass spectrometry

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4705694

The DnaC helicase loader is a dual ATP/ADP switch protein

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4705694

AAA+ superfamily ATPases: common structure--diverse function

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4705694

The DnaB.DnaC complex: a structure based on dimers assembled around an occluded channel.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4705694

Modeling of loops in protein structures

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4705694

Crystal structure of T7 gene 4 ring helicase indicates a mechanism for sequential hydrolysis of nucleotides

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4705694

Crystal structure of the helicase domain from the replicative helicase-primase of bacteriophage T7

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4705694

Protein secondary structure prediction based on position-specific scoring matrices

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4705694

Crystal structure of the N-terminal domain of the DnaB hexameric helicase

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4705694

NMR structure of the N-terminal domain of E. coli DnaB helicase: implications for structure rearrangements in the helicase hexamer

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4705694

AAA+: A class of chaperone-like ATPases associated with the assembly, operation, and disassembly of protein complexes

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4705694

Crystal structure of the delta' subunit of the clamp-loader complex of E. coli DNA polymerase III

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4705694

Defect in general priming conferred by linker region mutants of Escherichia coli dnaB

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4705694

The interaction between helicase and primase sets the replication fork clock

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4705694

Mechanisms and uses of hydrogen exchange

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4705694

Comparative protein modelling by satisfaction of spatial restraints

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4705694

Escherichia coli processivity clamp β from DNA polymerase III is dynamic in solution

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4705694

Structural basis for ATP-dependent DnaA assembly and replication-origin remodeling

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4705694

Quantitative analysis of nucleotide modulation of DNA binding by DnaC protein of Escherichia coli

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4705694

The dnaB protein of Escherichia coli: mechanism of nucleotide binding, hydrolysis, and modulation by dnaC protein.

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4705694

The dnaB-dnaC replication protein complex of Escherichia coli. II. Role of the complex in mobilizing dnaB functions.

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4705694

The dnaB-dnaC replication protein complex of Escherichia coli. I. Formation and properties

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4705694

Minimizing back exchange in the hydrogen exchange-mass spectrometry experiment

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4705694

Functional visualization of viral molecular motor by hydrogen-deuterium exchange reveals transient states

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4705694

On the solution structure of the T4 sliding clamp (gp45).

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4705694

Global conformation of the Escherichia coli replication factor DnaC protein in absence and presence of nucleotide cofactors

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4705694

Interactions of the Escherichia coli DnaB helicase hexamer with the replication factor the DnaC protein. Effect of nucleotide cofactors and the ssDNA on protein-protein interactions and the topology of the complex

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4705694

A Two-Protein Strategy for the Functional Loading of a Cellular Replicative DNA Helicase

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4705694

Essential amino acids of Escherichia coli DnaC protein in an N-terminal domain interact with DnaB helicase

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4705694

Structure and function of Escherichia coli DnaB protein: role of the N-terminal domain in helicase activity.

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4705694

Precise limits of the N-terminal domain of DnaB helicase determined by NMR spectroscopy

21 September 2018

1 reference

12 December 2020

Mechanism of dnaB protein action. II. ATP hydrolysis by dnaB protein dependent on single- or double-stranded DNA

1 reference

12 December 2020

Does single-stranded DNA pass through the inner channel of the protein hexamer in the complex with the Escherichia coli DnaB Helicase? Fluorescence energy transfer studies

1 reference

12 December 2020

Trading places on DNA--a three-point switch underlies primer handoff from primase to the replicative DNA polymerase

1 reference

12 December 2020

Interactions of nucleotide cofactors with the Escherichia coli replication factor DnaC protein

1 reference

12 December 2020

Multiple-step kinetic mechanism of DNA-independent ATP binding and hydrolysis by Escherichia coli replicative helicase DnaB protein: quantitative analysis using the rapid quench-flow method

1 reference

12 December 2020

Hydrogen exchange-mass spectrometry: optimization of digestion conditions

1 reference

12 December 2020

Mechanism of dnaB protein action. III. Allosteric role of ATP in the alteration of DNA structure by dnaB protein in priming replication

1 reference

12 December 2020

The Escherichia coli dnaC gene product. II. Purification, physical properties, and role in replication

1 reference

12 December 2020

Interaction of dnaA46 protein with a stimulatory protein in replication from the Escherichia coli chromosomal origin

1 reference

12 December 2020

Coordinated leading- and lagging-strand synthesis at the Escherichia coli DNA replication fork. V. Primase action regulates the cycle of Okazaki fragment synthesis

1 reference

12 December 2020

Identifiers

DOI

10.1093/NAR/GKV961

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26420830%20AND%20SRC:MED&resulttype=core&format=json

25 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26420830%20AND%20SRC:MED&resulttype=core&format=json

25 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26420830%20AND%20SRC:MED&resulttype=core&format=json