(Q36557544)

14 August 2017

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title

The case for mRNA 5' and 3' end cross talk during translation in a eukaryotic cell (English)

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14 August 2017

author name string

Anastassia V Komarova

series ordinal

1

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14 August 2017

Michèle Brocard

series ordinal

2

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14 August 2017

Katherine M Kean

series ordinal

3

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14 August 2017

language of work or name

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1 January 2006

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Progress in Molecular Biology and Translational Science

14 August 2017

published in

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14 August 2017

volume

81

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14 August 2017

page(s)

331-367

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Genomic RNAs of influenza viruses are held in a circular conformation in virions and in infected cells by a terminal panhandle

14 August 2017

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Efficient translation of rotavirus mRNA requires simultaneous interaction of NSP3 with the eukaryotic translation initiation factor eIF4G and the mRNA 3' end

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Eukaryotic initiation factor 4G-poly(A) binding protein interaction is required for poly(A) tail-mediated stimulation of picornavirus internal ribosome entry segment-driven translation but not for X-mediated stimulation of hepatitis C virus translat

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A complex network of RNA-RNA interactions controls subgenomic mRNA transcription in a tombusvirus

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7 January 2021

Fine Mapping of a cis-Acting Sequence Element in Yellow Fever Virus RNA That Is Required for RNA Replication and Cyclization

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Significance in Replication of the Terminal Nucleotides of the Flavivirus Genome

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Long-Range RNA-RNA Interactions Circularize the Dengue Virus Genome

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In vitro RNA synthesis from exogenous dengue viral RNA templates requires long range interactions between 5'- and 3'-terminal regions that influence RNA structure

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7 January 2021

Essential role of cyclization sequences in flavivirus RNA replication

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7 January 2021

La protein binds to NS5 and NS3 and to the 5' and 3' ends of Dengue 4 virus RNA.

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7 January 2021

Cap-independent translation of poliovirus mRNA is conferred by sequence elements within the 5' noncoding region

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7 January 2021

The N-terminal K homology domain of the poly(rC)-binding protein is a major determinant for binding to the poliovirus 5'-untranslated region and acts as an inhibitor of viral translation

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7 January 2021

Switch from translation to RNA replication in a positive-stranded RNA virus

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7 January 2021

Poliovirus RNA replication requires genome circularization through a protein-protein bridge

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7 January 2021

Possible Involvement of poly(A) in protein synthesks

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7 January 2021

Translational control during early dictyostelium development: Possible involvement of poly(A) sequences

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7 January 2021

How strong is the case for regulation of the initiation step of translation by elements at the 3' end of eukaryotic mRNAs?

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7 January 2021

Translation initiation factors eIF-iso4G and eIF-4B interact with the poly(A)-binding protein and increase its RNA binding activity

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7 January 2021

Wheat germ poly(A) binding protein enhances the binding affinity of eukaryotic initiation factor 4F and (iso)4F for cap analogues.

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7 January 2021

Electron microscopic evidence for the circular form of RNA in the cytoplasm of eukaryotic cells

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7 January 2021

The role of mRNA 5'-noncoding and 3'-end sequences on 40S ribosomal subunit recruitment, and how RNA viruses successfully compete with cellular mRNAs to ensure their own protein synthesis

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7 January 2021

Linking the 3' poly(A) tail to the subunit joining step of translation initiation: relations of Pab1p, eukaryotic translation initiation factor 5b (Fun12p), and Ski2p-Slh1p

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7 January 2021

The poly(A) binding protein is required for poly(A) shortening and 60S ribosomal subunit-dependent translation initiation

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7 January 2021

A common function for mRNA 5' and 3' ends in translation initiation in yeast

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7 January 2021

Biochemical characterisation of cap-poly(A) synergy in rabbit reticulocyte lysates: the eIF4G-PABP interaction increases the functional affinity of eIF4E for the capped mRNA 5'-end

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7 January 2021

Mammalian poly(A)-binding protein is a eukaryotic translation initiation factor, which acts via multiple mechanisms

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7 January 2021

Interrelationships of the pathways of mRNA decay and translation in eukaryotic cells

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7 January 2021

Correlations between Shine-Dalgarno sequences and gene features such as predicted expression levels and operon structures

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7 January 2021

Protein S1 counteracts the inhibitory effect of the extended Shine-Dalgarno sequence on translation

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7 January 2021

A shine-dalgarno-like sequence mediates in vitro ribosomal internal entry and subsequent scanning for translation initiation of coxsackievirus B3 RNA

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7 January 2021

Biochemical and functional analysis of a 9-nt RNA sequence that affects translation efficiency in eukaryotic cells

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7 January 2021

The 3' untranslated region of tobacco necrosis virus RNA contains a barley yellow dwarf virus-like cap-independent translation element

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7 January 2021

Conservation of RNA structures enables TNV and BYDV 5' and 3' elements to cooperate synergistically in cap-independent translation

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7 January 2021

Base-pairing between untranslated regions facilitates translation of uncapped, nonpolyadenylated viral RNA.

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7 January 2021

5'-3' RNA-RNA interaction facilitates cap- and poly(A) tail-independent translation of tomato bushy stunt virus mrna: a potential common mechanism for tombusviridae

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7 January 2021

A viral sequence in the 3'-untranslated region mimics a 5' cap in facilitating translation of uncapped mRNA.

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7 January 2021

A potential mechanism for selective control of cap-independent translation by a viral RNA sequence in cis and in trans

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7 January 2021

Structure and function of a cap-independent translation element that functions in either the 3' or the 5' untranslated region

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7 January 2021

The cap and poly(A) tail function synergistically to regulate mRNA translational efficiency

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7 January 2021

Genes and cis-acting sequences involved in replication of barley yellow dwarf virus-PAV RNA.

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7 January 2021

Characterisation of the subgenomic RNAs of an Australian isolate of barley yellow dwarf luteovirus

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7 January 2021

Extreme Reduction of Disease in Oats Transformed with the 5' Half of the Barley Yellow Dwarf Virus-PAV Genome

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7 January 2021

The 3'-terminal sequence of Escherichia coli 16S ribosomal RNA: complementarity to nonsense triplets and ribosome binding sites

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7 January 2021

How ribosomes select initiator regions in mRNA: base pair formation between the 3' terminus of 16S rRNA and the mRNA during initiation of protein synthesis in Escherichia coli

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7 January 2021

Specialized ribosome system: preferential translation of a single mRNA species by a subpopulation of mutated ribosomes in Escherichia coli

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7 January 2021

A single base change in the Shine-Dalgarno region of 16S rRNA of Escherichia coli affects translation of many proteins

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7 January 2021

Histone mRNA expression: multiple levels of cell cycle regulation and important developmental consequences

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7 January 2021

A 3' exonuclease that specifically interacts with the 3' end of histone mRNA

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7 January 2021

The stem-loop binding protein regulates translation of histone mRNA during mammalian oogenesis.

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7 January 2021

Stem-loop binding protein accumulates during oocyte maturation and is not cell-cycle-regulated in the early mouse embryo

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7 January 2021

Two Xenopus proteins that bind the 3' end of histone mRNA: implications for translational control of histone synthesis during oogenesis

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7 January 2021

Formation of the 3' end of histone mRNA

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7 January 2021

RNA-binding proteins in early development

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7 January 2021

Expression of metazoan replication-dependent histone genes

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7 January 2021

The gene for histone RNA hairpin binding protein is located on human chromosome 4 and encodes a novel type of RNA binding protein

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7 January 2021

The protein that binds the 3' end of histone mRNA: a novel RNA-binding protein required for histone pre-mRNA processing

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7 January 2021

The human histone gene expression regulator HBP/SLBP is required for histone and DNA synthesis, cell cycle progression and cell proliferation in mitotic cells

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7 January 2021

Drosophila stem loop binding protein coordinates accumulation of mature histone mRNA with cell cycle progression

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7 January 2021

Stem-loop binding protein, the protein that binds the 3' end of histone mRNA, is cell cycle regulated by both translational and posttranslational mechanisms

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7 January 2021

A novel zinc finger protein is associated with U7 snRNP and interacts with the stem-loop binding protein in the histone pre-mRNP to stimulate 3'-end processing

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7 January 2021

Changes in the stem-loop at the 3' terminus of histone mRNA affects its nucleocytoplasmic transport and cytoplasmic regulation

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7 January 2021

SLBP is associated with histone mRNA on polyribosomes as a component of the histone mRNP

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7 January 2021

Efficient extraction and partial purification of the polyribosome-associated stem-loop binding protein bound to the 3' end of histone mRNA

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7 January 2021

The histone mRNA 3' end is required for localization of histone mRNA to polyribosomes

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7 January 2021

The histone 3'-terminal stem-loop-binding protein enhances translation through a functional and physical interaction with eukaryotic initiation factor 4G (eIF4G) and eIF3

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7 January 2021

The histone 3'-terminal stem-loop is necessary for translation in Chinese hamster ovary cells

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7 January 2021

The stem-loop binding protein is required for efficient translation of histone mRNA in vivo and in vitro

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7 January 2021

The stem-loop binding protein stimulates histone translation at an early step in the initiation pathway

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7 January 2021

The human and mouse replication-dependent histone genes

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7 January 2021

Translation termination is involved in histone mRNA degradation when DNA replication is inhibited

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7 January 2021

Visualizing mRNA expression in plant protoplasts: factors influencing efficient mRNA uptake and translation

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7 January 2021

The sequence of the stem and flanking sequences at the 3' end of histone mRNA are critical determinants for the binding of the stem-loop binding protein

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7 January 2021

Picornavirus IRESes and the poly(A) tail jointly promote cap-independent translation in a mammalian cell-free system

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7 January 2021

Coupling of replication type histone mRNA levels to DNA synthesis requires the stem-loop sequence at the 3' end of the mRNA.

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7 January 2021

The stem-loop structure at the 3' end of histone mRNA is necessary and sufficient for regulation of histone mRNA stability

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7 January 2021

Multiple portions of poly(A)-binding protein stimulate translation in vivo

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7 January 2021

Initiation of protein synthesis from the A site of the ribosome

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7 January 2021

A prokaryotic-like mode of cytoplasmic eukaryotic ribosome binding to the initiation codon during internal translation initiation of hepatitis C and classical swine fever virus RNAs

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7 January 2021

Internal initiation of translation of picornavirus RNAs.

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7 January 2021

Initiation of protein synthesis by the eukaryotic translational apparatus on circular RNAs

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7 January 2021

Picornavirus internal ribosome entry segments: comparison of translation efficiency and the requirements for optimal internal initiation of translation in vitro

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7 January 2021

Comparison of the capacity of different viral internal ribosome entry segments to direct translation initiation in poly(A)-dependent reticulocyte lysates

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7 January 2021

Functional and structural similarities between the internal ribosome entry sites of hepatitis C virus and porcine teschovirus, a picornavirus

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7 January 2021

Translation of poliovirus rna in vitro: Changes in cleavage pattern and initiation sites by ribosomal salt wash

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7 January 2021

Cell proteins bind to multiple sites within the 5' untranslated region of poliovirus RNA.

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7 January 2021

A cellular protein that binds to the 5'-noncoding region of poliovirus RNA: implications for internal translation initiation

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7 January 2021

Comparative expression analysis of the genes encoding polypyrimidine tract binding protein (PTB) and its neural homologue (brPTB) in prenatal and postnatal mouse brain.

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7 January 2021

Molecular cloning and characterization of a new neuron-specific homologue of rat polypyrimidine tract binding protein

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7 January 2021

Cell-specific proteins regulate viral RNA translation and virus-induced disease

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7 January 2021

Translation eukaryotic initiation factor 4G recognizes a specific structural element within the internal ribosome entry site of encephalomyocarditis virus RNA.

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7 January 2021

Functional dissection of eukaryotic initiation factor 4F: the 4A subunit and the central domain of the 4G subunit are sufficient to mediate internal entry of 43S preinitiation complexes

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7 January 2021

Impaired binding of standard initiation factors mediates poliovirus translation attenuation

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7 January 2021

Detailed analysis of the requirements of hepatitis A virus internal ribosome entry segment for the eukaryotic initiation factor complex eIF4F

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https://api.crossref.org/works/10.1016%2FS0079-6603%2806%2981009-3

7 January 2021

Internal ribosome entry sites in eukaryotic mRNA molecules

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https://api.crossref.org/works/10.1016%2FS0079-6603%2806%2981009-3

7 January 2021

Recognition of picornavirus internal ribosome entry sites within cells; influence of cellular and viral proteins

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https://api.crossref.org/works/10.1016%2FS0079-6603%2806%2981009-3

7 January 2021

Cap-Poly(A) synergy in mammalian cell-free extracts. Investigation of the requirements for poly(A)-mediated stimulation of translation initiation

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7 January 2021

The DAZL family proteins are PABP-binding proteins that regulate translation in germ cells.

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7 January 2021

The mouse Dazla gene encodes a cytoplasmic protein essential for gametogenesis

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7 January 2021

Diverse spermatogenic defects in humans caused by Y chromosome deletions encompassing a novel RNA-binding protein gene

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7 January 2021

Meiotic cell cycle requirement for a fly homologue of human Deleted in Azoospermia

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7 January 2021

Zebrafish DAZ-like protein controls translation via the sequence 'GUUC'.

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https://api.crossref.org/works/10.1016%2FS0079-6603%2806%2981009-3

7 January 2021

Identification of two novel proteins that interact with germ-cell-specific RNA-binding proteins DAZ and DAZL1

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7 January 2021

Rolling back to BOULE.

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7 January 2021

The human DAZ genes, a putative male infertility factor on the Y chromosome, are highly polymorphic in the DAZ repeat regions

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7 January 2021

Expression of Xenopus Daz-like protein during gametogenesis and embryogenesis.

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7 January 2021

Biphasic subcellular localization of the DAZL-related protein boule in Drosophila spermatogenesis

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7 January 2021

DAZ family proteins exist throughout male germ cell development and transit from nucleus to cytoplasm at meiosis in humans and mice

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7 January 2021

Post-transcriptional regulation of the meiotic Cdc25 protein Twine by the Dazl orthologue Boule

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7 January 2021

Identification of target messenger RNA substrates for the murine deleted in azoospermia-like RNA-binding protein

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7 January 2021

The RNA-binding specificity of the mouse Dazl protein

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7 January 2021

Xenopus poly(A) binding protein: functional domains in RNA binding and protein-protein interaction

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https://api.crossref.org/works/10.1016%2FS0079-6603%2806%2981009-3

7 January 2021

Association of the mouse infertility factor DAZL1 with actively translating polyribosomes.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2806%2981009-3

7 January 2021

twine, a cdc25 homolog that functions in the male and female germline of Drosophila

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2806%2981009-3

7 January 2021

Human BOULE gene rescues meiotic defects in infertile flies

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2806%2981009-3

7 January 2021

Partial rescue of the Dazl knockout mouse by the human DAZL gene

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2806%2981009-3

7 January 2021

A human DAZ transgene confers partial rescue of the mouse Dazl null phenotype

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2806%2981009-3

7 January 2021

Hijacking the translation apparatus by RNA viruses

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2806%2981009-3

7 January 2021

Molecular analysis of the gene 6 from a porcine group C rotavirus that encodes the NS34 equivalent of group A rotaviruses

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2806%2981009-3

7 January 2021

Recognition of the rotavirus mRNA 3' consensus by an asymmetric NSP3 homodimer

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2806%2981009-3

7 January 2021

Rotavirus RNA-binding protein NSP3 interacts with eIF4GI and evicts the poly(A) binding protein from eIF4F.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2806%2981009-3

7 January 2021

RoXaN, a novel cellular protein containing TPR, LD, and zinc finger motifs, forms a ternary complex with eukaryotic initiation factor 4G and rotavirus NSP3

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2806%2981009-3

7 January 2021

A newly identified N-terminal amino acid sequence of human eIF4G binds poly(A)-binding protein and functions in poly(A)-dependent translation

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2806%2981009-3

7 January 2021

Recognition of eIF4G by rotavirus NSP3 reveals a basis for mRNA circularization

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2806%2981009-3

7 January 2021

Circular forms of Uukuniemi virion RNA: an electron microscopic study

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2806%2981009-3

7 January 2021

A segment of the 5' nontranslated region of encephalomyocarditis virus RNA directs internal entry of ribosomes during in vitro translation

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2806%2981009-3

7 January 2021

Role of 3'-end sequences in infectivity of poliovirus transcripts made in vitro

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2806%2981009-3

7 January 2021

Capped and conserved terminal structures in human rotavirus genome double-stranded RNA segments

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2806%2981009-3

7 January 2021

Rotavirus protein NSP3 (NS34) is bound to the 3' end consensus sequence of viral mRNAs in infected cells

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2806%2981009-3

7 January 2021

10.1016/S0079-6603(06)81009-3

Identifiers

DOI

1 reference

14 August 2017

1 reference