(Q36594620)

English

Biochemical and phylogenetic characterization of a novel diaminopimelate biosynthesis pathway in prokaryotes identifies a diverged form of LL-diaminopimelate aminotransferase

scientific article published on 29 February 2008

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scholarly article

1 reference

Europe PubMed Central

15 August 2017

Biochemical and phylogenetic characterization of a novel diaminopimelate biosynthesis pathway in prokaryotes identifies a diverged form of LL-diaminopimelate aminotransferase (English)

1 reference

Europe PubMed Central

15 August 2017

1 reference

based on heuristic

inferred from title

0 references

author name string

André O Hudson

1

1 reference

Europe PubMed Central

15 August 2017

Charles Gilvarg

2

1 reference

Europe PubMed Central

15 August 2017

Thomas Leustek

3

1 reference

Europe PubMed Central

15 August 2017

language of work or name

0 references

publication date

29 February 2008

1 reference

Europe PubMed Central

15 August 2017

Journal of Bacteriology

1 reference

Europe PubMed Central

15 August 2017

190

1 reference

Europe PubMed Central

15 August 2017

3256-3263

1 reference

Europe PubMed Central

15 August 2017

9

1 reference

Europe PubMed Central

15 August 2017

Crystal structure of LL-diaminopimelate aminotransferase from Arabidopsis thaliana: a recently discovered enzyme in the biosynthesis of L-lysine by plants and Chlamydia

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2347407

9 September 2017

L,L-diaminopimelate aminotransferase, a trans-kingdom enzyme shared by Chlamydia and plants for synthesis of diaminopimelate/lysine

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2347407

9 September 2017

A metabolic network in the evolutionary context: multiscale structure and modularity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2347407

9 September 2017

An LL-diaminopimelate aminotransferase defines a novel variant of the lysine biosynthesis pathway in plants

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2347407

9 September 2017

The subsystems approach to genome annotation and its use in the project to annotate 1000 genomes

1 reference

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9 September 2017

Biosynthesis of lysine in plants: evidence for a variant of the known bacterial pathways

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2347407

9 September 2017

MEGA3: Integrated software for Molecular Evolutionary Genetics Analysis and sequence alignment

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2347407

9 September 2017

Missing genes in metabolic pathways: a comparative genomics approach

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2347407

9 September 2017

Molecular evolution of the lysine biosynthetic pathways.

1 reference

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Escherichia coli strains that allow antibiotic-free plasmid selection and maintenance by repressor titration

1 reference

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Characterization of a bordetella pertussis diaminopimelate (DAP) biosynthesis locus identifies dapC, a novel gene coding for an N-succinyl-L,L-DAP aminotransferase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2347407

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Microbial genomes and "missing" enzymes: redefining biochemical pathways.

1 reference

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The use of gene clusters to infer functional coupling

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2347407

9 September 2017

Evolutionary recruitment of biochemically specialized subdivisions of Family I within the protein superfamily of aminotransferases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2347407

9 September 2017

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2347407

9 September 2017

Tight regulation, modulation, and high-level expression by vectors containing the arabinose PBAD promoter

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2347407

9 September 2017

Bacterial distribution of the use of succinyl and acetyl blocking groups in diaminopimelic acid biosynthesis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2347407

9 September 2017

Biosynthesis of alpha,epsilon-diaminopimelic acid in Bacillus megaterium

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2347407

9 September 2017

A functionally split pathway for lysine synthesis in Corynebacterium glutamicium

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2347407

9 September 2017

Occurrence of meso-α,ɛ-diaminopimelate dehydrogenase in Bacillus sphaericus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2347407

9 September 2017

Functional analysis of all aminotransferase proteins inferred from the genome sequence of Corynebacterium glutamicum.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2347407

30 September 2017

Nucleotide sequence and cloning in Bacillus subtilis of the Bacillus stearothermophilus pleiotropic regulatory gene degT

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2347407

30 September 2017

Identification and characterization of the last two unknown genes, dapC and dapF, in the succinylase branch of the L-lysine biosynthesis of Corynebacterium glutamicum

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2347407

28 June 2018

Studies on the active site of succinyl-CoA:tetrahydrodipicolinate N-succinyltransferase. Characterization using analogs of tetrahydrodipicolinate

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2347407

28 June 2018

Thermostable aspartate aminotransferase from a thermophilic Bacillus species. Gene cloning, sequence determination, and preliminary x-ray characterization.

1 reference

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The CATH Dictionary of Homologous Superfamilies (DHS): a consensus approach for identifying distant structural homologues.

1 reference

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20 September 2018

A prokaryotic gene cluster involved in synthesis of lysine through the amino adipate pathway: a key to the evolution of amino acid biosynthesis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2347407

20 September 2018

The Dual Biosynthetic Capability ofN-Acetylornithine Aminotransferase in Arginine and Lysine Biosynthesis†

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2347407

20 September 2018

Biosynthesis of lysine in plants: the putative role of meso-diaminopimelate dehydrogenase

1 reference

https://pubmed.ncbi.nlm.nih.gov/18310350

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

N-Succinyl-alpha-amino-6-ketopimelic acid

1 reference

https://pubmed.ncbi.nlm.nih.gov/18310350

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

N-Succinyl-L-diaminopimelic acid

1 reference

https://pubmed.ncbi.nlm.nih.gov/18310350

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1128/JB.01381-07

1 reference

Europe PubMed Central

15 August 2017

1 reference

Europe PubMed Central

15 August 2017

1 reference

Europe PubMed Central

15 August 2017

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0 references

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