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English
MPtopo: A database of membrane protein topology
scientific article published on February 2001
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Statements
instance of
scholarly article
1 reference
stated in
Europe PubMed Central
PMCID
2373945
retrieved
15 August 2017
title
MPtopo: A database of membrane protein topology
(English)
1 reference
stated in
Europe PubMed Central
PMCID
2373945
retrieved
15 August 2017
main subject
database
0 references
membrane proteins
1 reference
based on heuristic
inferred from title
author name string
S Jayasinghe
series ordinal
1
1 reference
stated in
Europe PubMed Central
PMCID
2373945
retrieved
15 August 2017
K Hristova
series ordinal
2
1 reference
stated in
Europe PubMed Central
PMCID
2373945
retrieved
15 August 2017
S H White
series ordinal
3
1 reference
stated in
Europe PubMed Central
PMCID
2373945
retrieved
15 August 2017
publication date
1 February 2001
1 reference
stated in
Europe PubMed Central
PMCID
2373945
retrieved
15 August 2017
published in
Protein Science
1 reference
stated in
Europe PubMed Central
PMCID
2373945
retrieved
15 August 2017
volume
10
1 reference
stated in
Europe PubMed Central
PMCID
2373945
retrieved
15 August 2017
page(s)
455-458
1 reference
stated in
Europe PubMed Central
PMCID
2373945
retrieved
15 August 2017
issue
2
1 reference
stated in
Europe PubMed Central
PMCID
2373945
retrieved
15 August 2017
cites work
Structure of a glycerol-conducting channel and the basis for its selectivity
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2373945
retrieved
30 September 2017
Structural determinants of water permeation through aquaporin-1
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2373945
retrieved
30 September 2017
Crystal structure of rhodopsin: A G protein-coupled receptor
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2373945
retrieved
30 September 2017
The protein information resource (PIR)
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2373945
retrieved
30 September 2017
Membrane protein folding and stability: physical principles
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2373945
retrieved
30 September 2017
Transmembrane topology of human glucose 6-phosphate transporter
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2373945
retrieved
30 September 2017
Principles governing amino acid composition of integral membrane proteins: application to topology prediction
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2373945
retrieved
30 September 2017
Prediction of transmembrane alpha-helices in prokaryotic membrane proteins: the dense alignment surface method
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2373945
retrieved
30 September 2017
Topology prediction for helical transmembrane proteins at 86% accuracy
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2373945
retrieved
30 September 2017
A model recognition approach to the prediction of all-helical membrane protein structure and topology
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2373945
retrieved
30 September 2017
Prediction of transmembrane segments in proteins utilising multiple sequence alignments
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2373945
retrieved
30 September 2017
The X-ray crystal structure of the membrane protein prostaglandin H2 synthase-1
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2373945
retrieved
30 September 2017
Transmembrane helices predicted at 95% accuracy
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2373945
retrieved
30 September 2017
TopPred II: an improved software for membrane protein structure predictions
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2373945
retrieved
30 September 2017
Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2373945
retrieved
30 September 2017
lac permease of Escherichia coli: topology and sequence elements promoting membrane insertion
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2373945
retrieved
30 September 2017
The SWISS-PROT protein sequence data bank
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2373945
retrieved
30 September 2017
Membrane protein structure prediction. Hydrophobicity analysis and the positive-inside rule
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2373945
retrieved
30 September 2017
A genetic approach to analyzing membrane protein topology.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2373945
retrieved
28 June 2018
Linear optimization of predictors for secondary structure. Application to transbilayer segments of membrane proteins
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2373945
retrieved
28 June 2018
Observations concerning topology and locations of helix ends of membrane proteins of known structure
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2373945
retrieved
28 June 2018
Statistical analysis of amino acid patterns in transmembrane helices: the GxxxG motif occurs frequently and in association with beta-branched residues at neighboring positions.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2373945
retrieved
20 September 2018
A simple method for predicting transmembrane alpha helices with better accuracy.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2373945
retrieved
20 September 2018
Estimating loop-helix interfaces in a polytopic membrane protein by deletion analysis
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2373945
retrieved
20 September 2018
Quadratic minimization of predictors for protein secondary structure. Application to transmembrane alpha-helices
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2373945
retrieved
20 September 2018
TMAP: a new email and WWW service for membrane-protein structural predictions.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2373945
retrieved
20 September 2018
Helix packing in membrane proteins
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/11266632
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1110/PS.43501
1 reference
stated in
Europe PubMed Central
PMCID
2373945
retrieved
15 August 2017
PMCID
2373945
1 reference
stated in
Europe PubMed Central
PMCID
2373945
retrieved
15 August 2017
PubMed ID
11266632
1 reference
stated in
Europe PubMed Central
PMCID
2373945
retrieved
15 August 2017
ResearchGate publication ID
227752808
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