(Q36697484)

English

Conserved nucleotides in the TAR RNA stem of human immunodeficiency virus type 1 are critical for Tat binding and trans activation: model for TAR RNA tertiary structure

scientific article published on May 1, 1992

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scholarly article

1 reference

Europe PubMed Central

15 August 2017

Conserved nucleotides in the TAR RNA stem of human immunodeficiency virus type 1 are critical for Tat binding and trans activation: model for TAR RNA tertiary structure (English)

1 reference

Europe PubMed Central

15 August 2017

nucleic acid tertiary structure

1 reference

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A1560535

9 October 2022

author name string

U. Delling

1

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9 October 2022

L. S. Reid

2

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9 October 2022

R. W. Barnett

3

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9 October 2022

M. Y. Ma

4

1 reference

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9 October 2022

S. Climie

5

1 reference

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9 October 2022

M. Sumner-Smith

6

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9 October 2022

N. Sonenberg

7

1 reference

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9 October 2022

language of work or name

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publication date

1 May 1992

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15 August 2017

full work available at URL

http://jvi.asm.org/cgi/content/abstract/66/5/3018

online access status

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9 October 2022

https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/1560535/?tool=EBI

online access status

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9 October 2022

https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/1560535/pdf/?tool=EBI

Portable Document Format

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9 October 2022

https://europepmc.org/articles/PMC241061

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Europe PubMed Central

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Europe PubMed Central

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9 October 2022

https://europepmc.org/articles/PMC241061?pdf=render

Portable Document Format

online access status

content deliverer

Europe PubMed Central

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Europe PubMed Central

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9 October 2022

Journal of Virology

1 reference

Europe PubMed Central

15 August 2017

66

1 reference

Europe PubMed Central

15 August 2017

3018-3025

1 reference

Europe PubMed Central

15 August 2017

5

1 reference

Europe PubMed Central

15 August 2017

Recombinant genomes which express chloramphenicol acetyltransferase in mammalian cells

1 reference

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Polymer support oligonucleotide synthesis XVIII: use of beta-cyanoethyl-N,N-dialkylamino-/N-morpholino phosphoramidite of deoxynucleosides for the synthesis of DNA fragments simplifying deprotection and isolation of the final product

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Trans-acting transcriptional regulation of human T-cell leukemia virus type III long terminal repeat

1 reference

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5'-3' exonucleases in phosphorothioate-based oligonucleotide-directed mutagenesis

1 reference

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30 September 2017

Specific binding of a HeLa cell nuclear protein to RNA sequences in the human immunodeficiency virus transactivating region

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=241061

30 September 2017

Identification of cellular proteins that bind to the human immunodeficiency virus type 1 trans-activation-responsive TAR element RNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=241061

30 September 2017

trans activation of human immunodeficiency virus type 1 is sequence specific for both the single-stranded bulge and loop of the trans-acting-responsive hairpin: a quantitative analysis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=241061

30 September 2017

Human immunodeficiency virus 1 tat protein binds trans-activation-responsive region (TAR) RNA in vitro

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=241061

30 September 2017

Structural requirements for trans activation of human immunodeficiency virus type 1 long terminal repeat-directed gene expression by tat: importance of base pairing, loop sequence, and bulges in the tat-responsive sequence.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=241061

30 September 2017

Identification and characterization of a HeLa nuclear protein that specifically binds to the trans-activation-response (TAR) element of human immunodeficiency virus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=241061

30 September 2017

HIV-1 tat protein stimulates transcription by binding to a U-rich bulge in the stem of the TAR RNA structure

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=241061

30 September 2017

Sequence-specific interaction of Tat protein and Tat peptides with the transactivation-responsive sequence element of human immunodeficiency virus type 1 in vitro

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=241061

30 September 2017

HIV-1 Tat protein trans-activates transcription in vitro

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=241061

30 September 2017

The HIV-1 Tat protein: an RNA sequence-specific processivity factor?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=241061

30 September 2017

Structural studies of protein-nucleic acid interaction: the sources of sequence-specific binding

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=241061

30 September 2017

Regulation of expression of human immunodeficiency virus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=241061

30 September 2017

The number of positively charged amino acids in the basic domain of Tat is critical for trans-activation and complex formation with TAR RNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=241061

30 September 2017

Heterologous basic domain substitutions in the HIV-1 Tat protein reveal an arginine-rich motif required for transactivation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=241061

30 September 2017

Class II aminoacyl transfer RNA synthetases: crystal structure of yeast aspartyl-tRNA synthetase complexed with tRNA(Asp)

1 reference

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30 September 2017

Regulation of HIV gene expression by RNA-protein interactions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=241061

30 September 2017

tat regulates binding of the human immunodeficiency virus trans-activating region RNA loop-binding protein TRP-185.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=241061

30 September 2017

Critical chemical features in trans-acting-responsive RNA are required for interaction with human immunodeficiency virus type 1 Tat protein

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=241061

30 September 2017

Genetic regulation of human immunodeficiency virus.

1 reference

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30 September 2017

The specificity of the human immunodeficiency virus type 2 transactivator is different from that of human immunodeficiency virus type 1.

1 reference

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Cell-type specificity of immunoglobulin gene expression is regulated by at least three DNA sequence elements

1 reference

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28 June 2018

HIV-1 tat trans-activation requires the loop sequence within tar.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=241061

28 June 2018

Tat trans-activates the human immunodeficiency virus through a nascent RNA target

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=241061

28 June 2018

Structure, sequence, and position of the stem-loop in tar determine transcriptional elongation by tat through the HIV-1 long terminal repeat

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=241061

28 June 2018

Fragments of the HIV-1 Tat protein specifically bind TAR RNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=241061

28 June 2018

RNA recognition by Tat-derived peptides: interaction in the major groove?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=241061

28 June 2018

Analysis of arginine-rich peptides from the HIV Tat protein reveals unusual features of RNA-protein recognition

1 reference

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28 June 2018

Regulation of mRNA accumulation by a human immunodeficiency virus trans-activator protein

1 reference

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A cellular protein that binds to the 5'-noncoding region of poliovirus RNA: implications for internal translation initiation

1 reference

https://pubmed.ncbi.nlm.nih.gov/1560535

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Functional substitution of the basic domain of the HIV-1 trans-activator, Tat, with the basic domain of the functionally heterologous Rev

1 reference

https://pubmed.ncbi.nlm.nih.gov/1560535

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A bulge structure in HIV-1 TAR RNA is required for Tat binding and Tat-mediated trans-activation

1 reference

https://pubmed.ncbi.nlm.nih.gov/1560535

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1128/JVI.66.5.3018-3025.1992

0 references

1 reference

Europe PubMed Central

15 August 2017

1 reference

Europe PubMed Central

15 August 2017

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