(Q36700946)

English

A plant snoRNP complex containing snoRNAs, fibrillarin, and nucleolin-like proteins is competent for both rRNA gene binding and pre-rRNA processing in vitro

scientific article published on August 2004

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scholarly article

1 reference

Europe PubMed Central

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31 December 2019

A plant snoRNP complex containing snoRNAs, fibrillarin, and nucleolin-like proteins is competent for both rRNA gene binding and pre-rRNA processing in vitro (English)

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15282326%20AND%20SRC:MED&resulttype=core&format=json

31 December 2019

endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

1 reference

Gene Ontology release 2020-05-02

Gene Ontology ID

Julio Saez-Vasquez

1

1 reference

Europe PubMed Central

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31 December 2019

3

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31 December 2019

author name string

David Caparros-Ruiz

2

1 reference

Europe PubMed Central

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31 December 2019

Manuel Echeverría

4

1 reference

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31 December 2019

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publication date

1 August 2004

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31 December 2019

Molecular and Cellular Biology

1 reference

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31 December 2019

24

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31 December 2019

16

1 reference

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31 December 2019

7284-7297

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15282326%20AND%20SRC:MED&resulttype=core&format=json

31 December 2019

Mfold web server for nucleic acid folding and hybridization prediction

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=479724

30 September 2017

Experimental RNomics: identification of 140 candidates for small non-messenger RNAs in the plant Arabidopsis thaliana

1 reference

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30 September 2017

A large nucleolar U3 ribonucleoprotein required for 18S ribosomal RNA biogenesis

1 reference

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30 September 2017

Xenopus U3 snoRNA GAC-Box A' and Box A sequences play distinct functional roles in rRNA processing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=479724

30 September 2017

snoRNA nuclear import and potential for cotranscriptional function in pre-rRNA processing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=479724

30 September 2017

Molecular basis of sequence-specific recognition of pre-ribosomal RNA by nucleolin

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=479724

30 September 2017

Accumulation and nuclear targeting of BnC24, a Brassica napus ribosomal protein corresponding to a mRNA accumulating in response to cold treatment

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=479724

30 September 2017

Fibrillarin genes encode both a conserved nucleolar protein and a novel small nucleolar RNA involved in ribosomal RNA methylation in Arabidopsis thaliana

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=479724

30 September 2017

Association of yeast RNA polymerase I with a nucleolar substructure active in rRNA synthesis and processing

1 reference

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30 September 2017

Ribosome synthesis in Saccharomyces cerevisiae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=479724

30 September 2017

Structure and functions of nucleolin.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=479724

30 September 2017

A specific isoform of hnRNP D interacts with DNA in the LR1 heterodimer: canonical RNA binding motifs in a sequence-specific duplex DNA binding protein

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=479724

30 September 2017

Mpp10p, a U3 small nucleolar ribonucleoprotein component required for pre-18S rRNA processing in yeast

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=479724

30 September 2017

Light regulation of the abundance of mRNA encoding a nucleolin-like protein localized in the nucleoli of pea nuclei

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=479724

30 September 2017

5'ETS rRNA processing facilitated by four small RNAs: U14, E3, U17, and U3.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=479724

30 September 2017

Developmental and cell cycle regulation of alfalfa nucMs1, a plant homolog of the yeast Nsr1 and mammalian nucleolin.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=479724

30 September 2017

A U3 small nuclear ribonucleoprotein-requiring processing event in the 5' external transcribed spacer of Xenopus precursor rRNA.

1 reference

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30 September 2017

Mutational analysis of an essential binding site for the U3 snoRNA in the 5' external transcribed spacer of yeast pre-rRNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=479724

30 September 2017

Base pairing between U3 and the pre-ribosomal RNA is required for 18S rRNA synthesis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=479724

30 September 2017

Interaction of nucleolar phosphoprotein C23 with cloned segments of rat ribosomal DNA

1 reference

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30 September 2017

Cleavage of Structural Proteins during the Assembly of the Head of Bacteriophage T4

1 reference

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30 September 2017

Affinity purification of sequence-specific DNA binding proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=479724

30 September 2017

Amplification of plant U3 and U6 snRNA gene sequences using primers specific for an upstream promoter element and conserved intragenic regions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=479724

30 September 2017

Basic local alignment search tool

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=479724

30 September 2017

The U3 small nucleolar ribonucleoprotein functions in the first step of preribosomal RNA processing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=479724

30 September 2017

Structural analysis of the short length ribosomal DNA variant from Pisum sativum L. cv. Alaska

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=479724

30 September 2017

In-gel digestion of proteins for internal sequence analysis after one- or two-dimensional gel electrophoresis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=479724

30 September 2017

NSR1 is required for pre-rRNA processing and for the proper maintenance of steady-state levels of ribosomal subunits

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=479724

30 September 2017

Nucleolin provides a link between RNA polymerase I transcription and pre-ribosome assembly.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=479724

28 June 2018

Nucleolin functions in the first step of ribosomal RNA processing.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=479724

28 June 2018

Clusters of multiple different small nucleolar RNA genes in plants are expressed as and processed from polycistronic pre-snoRNAs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=479724

28 June 2018

The terminal balls characteristic of eukaryotic rRNA transcription units in chromatin spreads are rRNA processing complexes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=479724

28 June 2018

The complete nucleotide sequence of the intergenic spacer region of an rDNA operon from Brassica oleracea and its comparison with other crucifers.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=479724

28 June 2018

rDNA intergenic region from Arabidopsis thaliana. Structural analysis, intraspecific variation and functional implications.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=479724

28 June 2018

Identification of an Arabidopsis DNA-binding protein with homology to nucleolin

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=479724

28 June 2018

Repression of RNA polymerase I transcription by nucleolin is independent of the RNA sequence that is transcribed.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=479724

5 September 2018

Structure and comparative analysis of the rDNA intergenic spacer of Brassica rapa. Implications for the function and evolution of the Cruciferae spacer.

1 reference

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5 September 2018

Transcription of tomato ribosomal DNA and the organization of the intergenic spacer

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=479724

5 September 2018

Nucleolin is a sequence-specific RNA-binding protein: characterization of targets on pre-ribosomal RNA

1 reference

https://pubmed.ncbi.nlm.nih.gov/15282326

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Intraspecific length heterogeneity of the rDNA-IGR in Arabidopsis thaliana due to homologous recombination

1 reference

https://pubmed.ncbi.nlm.nih.gov/15282326

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structural and transcriptional characterization of the external spacer of a ribosomal RNA nuclear gene from a higher plant

1 reference

https://pubmed.ncbi.nlm.nih.gov/15282326

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Characterization of species-specific repeated DNA sequences from B. nigra

1 reference

https://pubmed.ncbi.nlm.nih.gov/15282326

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A proteomic study of the arabidopsis nuclear matrix

1 reference

https://pubmed.ncbi.nlm.nih.gov/15282326

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Analysis of pre-mRNA processing in transfected plant protoplasts

1 reference

https://pubmed.ncbi.nlm.nih.gov/15282326

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

1 reference

https://pubmed.ncbi.nlm.nih.gov/15282326

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Analysis of nucleolar transcription and processing domains and pre-rRNA movements by in situ hybridization

1 reference

https://pubmed.ncbi.nlm.nih.gov/15282326

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Interaction of nucleolin with an evolutionarily conserved pre-ribosomal RNA sequence is required for the assembly of the primary processing complex

1 reference

https://pubmed.ncbi.nlm.nih.gov/15282326

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Two ribosomal DNA-binding factors interact with a cluster of motifs on the 5' external transcribed spacer, upstream from the primary pre-rRNA processing site in a higher plant

1 reference

https://pubmed.ncbi.nlm.nih.gov/15282326

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Trypanosoma brucei 5'ETS A'-cleavage is directed by 3'-adjacent sequences, but not two U3 snoRNA-binding elements, which are all required for subsequent pre-small subunit rRNA processing events

1 reference

https://pubmed.ncbi.nlm.nih.gov/15282326

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1128/MCB.24.16.7284-7297.2004

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15282326%20AND%20SRC:MED&resulttype=core&format=json

31 December 2019

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15282326%20AND%20SRC:MED&resulttype=core&format=json

31 December 2019

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15282326%20AND%20SRC:MED&resulttype=core&format=json

31 December 2019

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