(Q36740162)

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A simple algorithm for quantifying DNA methylation levels on multiple independent CpG sites in bisulfite genomic sequencing electropherograms

scientific article published on 14 May 2008

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scholarly article

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

A simple algorithm for quantifying DNA methylation levels on multiple independent CpG sites in bisulfite genomic sequencing electropherograms (English)

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

DNA methylation

0 references

author name string

Tatiana I Leakey

1

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

Jerzy Zielinski

2

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

Rachel N Siegfried

3

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

Eric R Siegel

4

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

Chun-Yang Fan

5

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

Craig A Cooney

6

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

language of work or name

0 references

publication date

14 May 2008

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

Nucleic Acids Research

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

36

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

11

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

e64

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

Epigenetics and complex disease: from etiology to new therapeutics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441810

29 September 2017

DNA methylation in the human cerebral cortex is dynamically regulated throughout the life span and involves differentiated neurons

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441810

29 September 2017

DNA methylation impacts on learning and memory in aging

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441810

29 September 2017

Maternal care, the epigenome and phenotypic differences in behavior

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441810

29 September 2017

Epigenetic mechanisms in the context of complex diseases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441810

29 September 2017

Epigenetics--DNA-based mirror of our environment?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441810

29 September 2017

The epigenomics of cancer

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441810

29 September 2017

Maternal genistein alters coat color and protects Avy mouse offspring from obesity by modifying the fetal epigenome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441810

29 September 2017

DNA methylation and human disease

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441810

29 September 2017

Methylation-specific MLPA (MS-MLPA): simultaneous detection of CpG methylation and copy number changes of up to 40 sequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441810

29 September 2017

Single nucleotide extension technology for quantitative site-specific evaluation of metC/C in GC-rich regions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441810

29 September 2017

Quantitative DNA methylation analysis based on four-dye trace data from direct sequencing of PCR amplificates

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441810

29 September 2017

A simple method for estimating global DNA methylation using bisulfite PCR of repetitive DNA elements

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441810

29 September 2017

Analysis and quantification of multiple methylation variable positions in CpG islands by Pyrosequencing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441810

29 September 2017

Sensitive and quantitative universal Pyrosequencing methylation analysis of CpG sites

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441810

29 September 2017

A novel multiplex quantitative DNA array based PCR (MQDA-PCR) for quantification of transgenic maize in food and feed

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441810

29 September 2017

Transgenerational inheritance of epigenetic states at the murine Axin(Fu) allele occurs after maternal and paternal transmission

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441810

29 September 2017

Evaluation of a potential epigenetic biomarker by quantitative methyl-single nucleotide polymorphism analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441810

29 September 2017

MethPrimer: designing primers for methylation PCRs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441810

29 September 2017

Maternal methyl supplements in mice affect epigenetic variation and DNA methylation of offspring

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441810

29 September 2017

Measuring agreement in method comparison studies

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441810

29 September 2017

Base-calling of automated sequencer traces using phred. II. Error probabilities

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441810

29 September 2017

Base-calling of automated sequencer traces using phred. I. Accuracy assessment

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441810

29 September 2017

COBRA: a sensitive and quantitative DNA methylation assay

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441810

29 September 2017

High sensitivity mapping of methylated cytosines

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441810

29 September 2017

Statistical methods for assessing agreement between two methods of clinical measurement

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441810

29 September 2017

Sequence analysis and editing for bisulphite genomic sequencing projects

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441810

28 June 2018

Methylation is co-ordinated on the putative replication origins of Physarum ribosomal DNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441810

28 June 2018

Upstream CpG island methylation of the PAX3 gene in human rhabdomyosarcomas.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441810

5 September 2018

Quantification of single nucleotide polymorphisms by automated DNA sequencing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441810

5 September 2018

Methylation dynamics of imprinted genes in mouse germ cells.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441810

5 September 2018

Acquisition of the H19 methylation imprint occurs differentially on the parental alleles during spermatogenesis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441810

5 September 2018

Genomic sequencing by ligation-mediated PCR.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441810

5 September 2018

Qualitative and quantitative polymerase chain reaction-based methods for DNA methylation analyses

1 reference

https://pubmed.ncbi.nlm.nih.gov/18480118

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Quantification of the methylation status of the PWS/AS imprinted region: comparison of two approaches based on bisulfite sequencing and methylation-sensitive MLPA

1 reference

https://pubmed.ncbi.nlm.nih.gov/18480118

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

DNA methylation: Bisulphite modification and analysis

1 reference

https://pubmed.ncbi.nlm.nih.gov/18480118

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1093/NAR/GKN210

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

ResearchGate publication ID

0 references

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