(Q36749358)

16 August 2017

OGtree: a tool for creating genome trees of prokaryotes based on overlapping genes (English)

1 reference

16 August 2017

0 references

Li-Wei Jiang

1

1 reference

16 August 2017

Kuang-Lun Lin

series ordinal

2

1 reference

16 August 2017

Chin Lung Lu

series ordinal

3

1 reference

16 August 2017

language of work or name

English

0 references

publication date

2 May 2008

1 reference

16 August 2017

Nucleic Acids Research

1 reference

16 August 2017

36

1 reference

16 August 2017

Web Server issue

1 reference

16 August 2017

W475-80

1 reference

BPhyOG: an interactive server for genome-wide inference of bacterial phylogenies based on overlapping genes

16 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2447762

Overlapping genes as rare genomic markers: the phylogeny of gamma-Proteobacteria as a case study

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2447762

Benchmarking ortholog identification methods using functional genomics data

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2447762

Genome trees and the nature of genome evolution

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2447762

Comparative study of overlapping genes in bacteria, with special reference to Rickettsia prowazekii and Rickettsia conorii

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2447762

Properties of overlapping genes are conserved across microbial genomes

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2447762

From gene trees to organismal phylogeny in prokaryotes: the case of the gamma-Proteobacteria

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2447762

HGT-DB: a database of putative horizontally transferred genes in prokaryotic complete genomes

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2447762

Purifying and directional selection in overlapping prokaryotic genes

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2447762

Stability and evolution of overlapping genes

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2447762

Comparative study of overlapping genes in the genomes of Mycoplasma genitalium and Mycoplasma pneumoniae

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2447762

Genome phylogeny based on gene content

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2447762

A genomic perspective on protein families

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2447762

Genome rearrangement distances and gene order phylogeny in gamma-Proteobacteria

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2447762

Genome rearrangement with gene families.

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2447762

On dynamics of overlapping genes in bacterial genomes

5 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18456706

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Gene order breakpoint evidence in animal mitochondrial phylogeny

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18456706

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/GKN240

1 reference

16 August 2017

journals/nar/JiangLL08

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

16 August 2017

1 reference